| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05188 |
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| Symbol | RSp0235 |
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| ID | 1222366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 293321 |
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| End bp | 296143 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637240094 |
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| Product | putative maltooligosyl trehalose synthase transmembrane protein |
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| Protein accession | NP_521796 |
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| Protein GI | 17548456 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGC CCGCCTCGCC CACGGCGGTG CCGCGCGCCA CGCTGCGCCT GCAACTGCAC
CGCGCCTTCA CCTTCGACCA TGCCCGCGCG CTGCTCGACG ACATCGCCGC GCTCGGCATC
TCGCACCTGT ACGTCTCGCC CATCACCACG GCGCAGCCCG GCTCGATGCA CGGCTACGAC
GTGGTCGACC CGACGCGCGT CAACCCCGAG CTCGGCGGCG AAGATGCACT GGGCCGGCTG
GTGGCGGCGC TGCACGCGCG CGGCATGGGG CTCATCGTCG ATATCGTGCC CAACCACATG
GCCGTGGGCG GCGCGCACAA CGCCTGGTGG CTGGACGTGC TCGAAAACGG CCCGGCCAGC
GCCTGGGCGC ACGCCTTCGA CATCCAGTGG CAGCCGCCGC AGCCGGCGCT GCACGGCAAG
GTGCTCGCGC CGTTCCTGGG CGAGCCGTAC GACACAGCGC TGCAAGGCGG CCGCCTGACG
CTGCACTACG ATCCCGGGGC CGCGCGCCTG GCGATCGCCT ACCACGACCA TCGCTTCCCG
ATCGCGCTGG CGGACTACGC CTGCGTCCTG CGCGGCGCGG GTCCGTCGGG CGAACGCGAT
ACGGATGCCG CGCTCGATGC CGTGGCCGAG CGCTTCGCGG CGCTGCAATC GACGCGTGCC
CTCCACGCGC GCCGCGCGCA CGCCGACGCC GCGCGCACCG CCCTGCGCGA CTTCGCCGCG
ACCGACGCCG GACGCGCGCG CATCGACCGC GCCGTGGCCG CCCTCAACGC CGCCCCGGAA
CAGCTGCATG CCCTGATGGC GCGCCAATCC TGGCGGCTCG CCCACTGGCG CTGCGCCAAC
GACGAGATCA ACTGGCGCCG CTTCTTCGAC ATCGGTTCGC TGGCCGGGCT GAGCGTCGAG
CGGGCGGACG TCTTCGAGGC AACGCACGCG CTGATCTTCC GGCTCTACCG GCAGGGCTGG
ATCGACGGCG TGCGGATCGA CCACGTCGAT GGCCTGGCCG ACCCCGCCGG CTATTGCCGC
GCGCTGCGCC AGCGGCTCGC CGCCGAAGAC GCCCACCGCC CCGCCGACCG CCGGCTCGGC
CGGCCCTGGA TCGTGGTGGA AAAAATCCTC GCCGCCGACG AACCCATGCG CACCGGCTGG
GATATCGACG GCACCAGCGG CTACGACTTC ATGAACCAGG CCGGTGCGCT GTTGCACGAT
GCCGCCGGCG AGGCCACGCT GACGCAAGCC TGGCTCGACT GGACCGGCAG GCCGGCCGCC
GAAGCGCACT TCCGTGTCAC GGCCCTGGCG GCGCGGCGCC GCATCCTGCA TGAACACTTC
GCCACCGAAC TGGACGCCGC GACCTGGGCC CTGCATGCGG TGGCGCAGCA GCAGCGCGAC
GCGCACGACG TGACCTGGCA CGCCATCCGC CGCGCGCTCG CCGAACTGGT CGTGCACCTG
AGCGTCTACC GCACCTATGC CGACGCGCAC GGCCGCGATA CGCAGGACAC CGCCATCGTG
CGGCGTGCCA TCCACGACGC GATGCCGCAC CTGCGGCGCG TCGACCAGCC GCTGCTGGCG
CGGCTCGACG CCTGGCTCGG CGGCGAGCCG GCCGGGCACG ACCGGCTGCG CCAGCTTGCG
CTGCGGCGCG GCCAGCAGCT GTCGTCGCCG GTGGCGGCCA AGGCGGTGGA AGACACCGCG
TGCTACCGCT ACGGACGGCT GCTGTCGCGC AACGAAGTCG GCGCCGACCC CGGTGCATTC
ACGCTCGATG CCGCCGCCTT CCACCAGGCG ATGGCGGCGC GCGCGCGCCT GTGGCCGCAC
GCGATGCTGG CCACCGCCAC GCACGATCAC AAGCGCGGCG AAGACGTGCG CGCCCGGCTG
GCCGTGCTGT CGGAGCGGCC CGCGCACTGG CTGGCCGCCG CGCTGCCATG GCGCGCCGCG
CACGCGCGCT GGGTGCGGCC GCTGCCGGAG GGCCCGGCCC CCCCGCCCGA CGCGCAATGG
ATGCTCTACC AGACGCTGGT CGGCGCCTGG CCGCCCGGCC TCGACTGGCG CGATGCCGAC
GGCGTGCGCG CCTTCGCCGA GCGCATCGCG CAATGGCAGC ACAAGGCCCT GCGCGAAGCC
AAGCTGCGCA CCGACTGGCT CGCGCCCGAC CTCGACTACG AGCAGGCCTG CCACGATTTC
GTCTTCACGC TGCTCACCGG CGAGGCGGCC CCGGCGTTCC TGCCGTCGCT GGCCGCATTC
GTGCGCACCA TCGCGCCGGC CGGCGCCGTC AACGGGCTCG CGCAAATGCT GCTGCGCGTG
ACCGTGCCGG GCGTCCCCGA TCTCTACCAG GGCACGGACC TCTGGGACAC CAGCCTGGTC
GATCCGGACA ACCGTCGCCC CGTCGACTTC GCGGTGCGCC ACCGTTCGCT GCGCGCGCTG
CAGACCCATC CGGAGCACAG CCTCGCCCCG CTGCTTGCCC ACTGGACCGA CGGTCGCATC
AAGCAGGCGG TGCTGGCGCG CGCCCTGGGC GTGCGCGCTG CCATGCCCGA GGTCTTTGCG
GCGGGCCGAT ACCTGCCGCT GGCCCTCAGC GGCAGCGGCG GCGCCCATGC GCTTGCCTTC
GCGCGCGAGC ATGCCGGCCG CTGGGTGGTG GCGATCGTGC CGCTGCACGC GGCCGCGCTG
CTGGGCCATG CCGCCGTGCC GGTGTTTCCC GCGGGCGCGT GGCGCGACAC GACGGTCTGC
CTGCCCGCGC CGCTGGCGTC GATACCGCTG CACAGCGTGT TCGACGGCCA GACGCTGTGC
GGCGCCCGCC TCGCCCTGGG GCAAACGCTG GGCGCCTTGC CCGTCGCCCT GCTGCACGGT
TAG
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| Protein sequence | MTPPASPTAV PRATLRLQLH RAFTFDHARA LLDDIAALGI SHLYVSPITT AQPGSMHGYD
VVDPTRVNPE LGGEDALGRL VAALHARGMG LIVDIVPNHM AVGGAHNAWW LDVLENGPAS
AWAHAFDIQW QPPQPALHGK VLAPFLGEPY DTALQGGRLT LHYDPGAARL AIAYHDHRFP
IALADYACVL RGAGPSGERD TDAALDAVAE RFAALQSTRA LHARRAHADA ARTALRDFAA
TDAGRARIDR AVAALNAAPE QLHALMARQS WRLAHWRCAN DEINWRRFFD IGSLAGLSVE
RADVFEATHA LIFRLYRQGW IDGVRIDHVD GLADPAGYCR ALRQRLAAED AHRPADRRLG
RPWIVVEKIL AADEPMRTGW DIDGTSGYDF MNQAGALLHD AAGEATLTQA WLDWTGRPAA
EAHFRVTALA ARRRILHEHF ATELDAATWA LHAVAQQQRD AHDVTWHAIR RALAELVVHL
SVYRTYADAH GRDTQDTAIV RRAIHDAMPH LRRVDQPLLA RLDAWLGGEP AGHDRLRQLA
LRRGQQLSSP VAAKAVEDTA CYRYGRLLSR NEVGADPGAF TLDAAAFHQA MAARARLWPH
AMLATATHDH KRGEDVRARL AVLSERPAHW LAAALPWRAA HARWVRPLPE GPAPPPDAQW
MLYQTLVGAW PPGLDWRDAD GVRAFAERIA QWQHKALREA KLRTDWLAPD LDYEQACHDF
VFTLLTGEAA PAFLPSLAAF VRTIAPAGAV NGLAQMLLRV TVPGVPDLYQ GTDLWDTSLV
DPDNRRPVDF AVRHRSLRAL QTHPEHSLAP LLAHWTDGRI KQAVLARALG VRAAMPEVFA
AGRYLPLALS GSGGAHALAF AREHAGRWVV AIVPLHAAAL LGHAAVPVFP AGAWRDTTVC
LPAPLASIPL HSVFDGQTLC GARLALGQTL GALPVALLHG
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