| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS04802 |
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| Symbol | RSp1525 |
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| ID | 1223837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1910176 |
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| End bp | 1911885 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637241388 |
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| Product | hypothetical protein |
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| Protein accession | NP_523084 |
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| Protein GI | 17549744 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.113999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCG CAACCGCAGT CGGCGCCCGT GCAACCGACC CTCGGGAAGA ACGTTTCCCC
CCCTCCAAGC GCAACCCCTT GCGGACCCTG CGCGTCACCG TGTGGGCTTC ATGTGCCGTC
GGTTTCGCGA TCGGCGCGCC GGGCACGCAC GGCCAGCCGA CCCATCTGCT CATCCTGGCC
GTCGGCCTGC TGCTCATCCT GCTGCCGGTG GACTGGCTGC TGCGCAGGCA GCTCCGCGCG
GGACGCAGCC TGATCACCAT CACGGGCGAT GCCATCGCGT CCGCGGCGTT CAGCGGCAAG
GAGAAGCGCT TGCGCTGGAG CGAGATCGAA AGCATGACGG TGGAGACGGT CCAGAACGCT
CCCTATCTCG CCTTCCGGCT CAGGGCGGCC TCCGGCACGG CGAGCAAGCG GCGGTTCCGG
TTCGGGCGTG ACCGGTCCAA GCGCATCCTC GCGCTGTCGT CGTTCGACAC GGCCGACCGC
GAGCGCCTGG TGGACTCCAT CCAGATCCAC CTGCGCCTGC GCGGCGGCAT GACCGGCACG
CCATCCATGC CGGTGAACCC GTTCAAGGCC GAGCGCCAGT TCGAAGAACA GCTGGCGGCC
CTGGCGCCCC GGCCCCACCT CACCCACGCG CTGATCGCGC TCAATGTGCT GGCCTGGCTG
GCAACGCTGG TGCTCGGCGG CAATCCGCTC CAGACGCCGA CCGACGTGCT GTTCAACCTG
GGCGGCAATG CGGCCTTCGA GGTGCAGCAA GGCGAATGGT GGCGCCTGCT GAGCGCCACC
TTCCTCCACG CGGGCGTGCT CCACCTGGCG GTCAACATGA TCGGCCTGTA CGCGGCGGGG
GTCACGGTCG AGCGCATCTA CGGGCCGGTG GCCTACCTCC TGATCTACCT GGGCGCCGGT
CTGCTCGGCA GCGCATTGAG CCTGTCGTTT GCCGCGCAGC ACGCCATCGG TGTCGGCGCG
TCCGGCGCGG TGTTCGGCGT GGCCGGGGCG TGGCTGGTGG CCATCCGCCA ATACCGTGGC
CGGATGCCGG AAACGCTGAG CAAGCGGCTG CTCACGCAGA TCGGCTTGTT TGTCCTGTAC
TCCCTGGTGC AAGGACTGAC CAAGCCGGGC GTGGACAACG CCGCCCACGT CGGCGGCCTC
ATCGGCGGCT GCCTGCTGGC GTGCATCCTG CCGGCACGGC TCGACATGGA CCGCTACCGC
CGACGGCTTC CCGGCCGCGC CGCCATGGCA CTGGCGGCCA CCGGCGCGGG CATCGCGGTG
CTCGCCATGC TGGCACCGCG GGCCGCGCTC GACCATCGCC AATTCTTCGC CAGCGCCGAG
GCGGTCGCGC GCGGCTTCAG CGCCGTCGGT GCCGCGGCGC AGGCCACGGA ATCGGACCAG
CAGGCCTTTG CCGCCGGACG CCTGTCGGCG CGCCAATGGG TCGAGCGCAA TCACGCCGTC
CACGTGCCGG CGCTGCGGCA GGCCACGGCC ACGCTGCGCT CAGCCAGGCT CGCGCAAGGC
GACCCGCGCG CGGACCTGCT ACGCGACACC CTGCTCTACG CCGACCTGAC GGCCGAAGCA
ATGGAACTGA CGGTGATGGA GACCCCCGAG AGCCGTGACC CCGTGTCGAC CGACCCGGCT
CGCCTGGCGC ACGTCCAGCG CCAACTGGAA GCGGTCGGCG AGCGGCTCAC GCGCGATGCC
GACGCGTTGC GGCGCCGCCC CTTCAACTAG
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| Protein sequence | MEPATAVGAR ATDPREERFP PSKRNPLRTL RVTVWASCAV GFAIGAPGTH GQPTHLLILA
VGLLLILLPV DWLLRRQLRA GRSLITITGD AIASAAFSGK EKRLRWSEIE SMTVETVQNA
PYLAFRLRAA SGTASKRRFR FGRDRSKRIL ALSSFDTADR ERLVDSIQIH LRLRGGMTGT
PSMPVNPFKA ERQFEEQLAA LAPRPHLTHA LIALNVLAWL ATLVLGGNPL QTPTDVLFNL
GGNAAFEVQQ GEWWRLLSAT FLHAGVLHLA VNMIGLYAAG VTVERIYGPV AYLLIYLGAG
LLGSALSLSF AAQHAIGVGA SGAVFGVAGA WLVAIRQYRG RMPETLSKRL LTQIGLFVLY
SLVQGLTKPG VDNAAHVGGL IGGCLLACIL PARLDMDRYR RRLPGRAAMA LAATGAGIAV
LAMLAPRAAL DHRQFFASAE AVARGFSAVG AAAQATESDQ QAFAAGRLSA RQWVERNHAV
HVPALRQATA TLRSARLAQG DPRADLLRDT LLYADLTAEA MELTVMETPE SRDPVSTDPA
RLAHVQRQLE AVGERLTRDA DALRRRPFN
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