Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS04794 |
Symbol | RSp1517 |
ID | 1223829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1899114 |
End bp | 1899758 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637241380 |
Product | hypothetical protein |
Protein accession | NP_523076 |
Protein GI | 17549736 |
COG category | [S] Function unknown |
COG ID | [COG2964] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.40629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0119092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCTCA CTGAAGAAAA CCGCCTGCTG CTGCGCGAGG GCAAGAAGAT CGTCGAGGCG CTCGGCAAGA CGCTGGCGCC GCTGGTGGAG GTCGTGCTGC ATGACCTCAA GCGGCCCGAG CACGCCGTCG TTGCCATCGC CAACAACCTG TCGGGCCGGC AGGTGGGCGA TGCCGCTACC GAGCTGGGCC TGGCGCGCAT GGCCGACCCG GGCTTTCCGG AAGTCATCCA GAACTACGCC AACCGCTTCC CGGATGGGCG GCCGGCCAAG AGCACGTCGA TCGGCCTGAA GAACAGCCGT GGCGAATACG TGGCCGCGAT CTGCCTGAAC ATGGATGTGT CCCTGCTGAG CGCCGTGACG GCCGGCCTGG GGCAATTGAT GCAGACCGAC GTGGCCGCGC CGCCGGTGCC CGAATCCCTG GCGTCGCACG GGGTGGAGGC GGTGCGCATG GCGCTGGAGC GCTTTGCCGC CGCCCGCAAC ACCACGCCCA TGGGCATGAC CCTCGAACAG CGCCGCGAAG CCATGCGCGA ACTGTCCGCC AGCGGGCTGC TGAACCTGCG TCGCGCGCTG TCCGAAGTCG CGCAGACGCT GGGCGTGGCG CGCTCCACCG TCTACACCTA CCTCCCCGAG GCCACCACGC CATGA
|
Protein sequence | MDLTEENRLL LREGKKIVEA LGKTLAPLVE VVLHDLKRPE HAVVAIANNL SGRQVGDAAT ELGLARMADP GFPEVIQNYA NRFPDGRPAK STSIGLKNSR GEYVAAICLN MDVSLLSAVT AGLGQLMQTD VAAPPVPESL ASHGVEAVRM ALERFAAARN TTPMGMTLEQ RREAMRELSA SGLLNLRRAL SEVAQTLGVA RSTVYTYLPE ATTP
|
| |