| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS04760 |
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| Symbol | RSp1335 |
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| ID | 1223647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1684492 |
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| End bp | 1686858 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637241198 |
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| Product | putative RHS-related protein |
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| Protein accession | NP_522894 |
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| Protein GI | 17549554 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTGA AGCGATTCAT TGAGAAGCAG CGTTGGGCTG CAGCGTTAAG TACCGGGGCC
GAGCGAGAAC CTGGCCTGAC AGGCCGACAT ACCCCGCTGT ATCGCGCCGT TAGCGCTGCT
GCCCTGCTCA CGTTGAGCGC GCAGATGCTG GCCCAGACGC AAGTCTCAAC GACCCAATAT
GCCTATGACA TGGTCGGCAA CCTGACGCAA ATCACCGACC CGCGCGGGCT GGTGACGACG
CTGACCTACG ATGCCCTGGG TCGCCGTACG AAAGTGCAAG GACCGCCAGC CACGCCAGGC
GGCGCAGTGC CGACCGCCGT CTTCAACTAC GATGGACAGG ATCGCGTGCG GCAAATCACC
GACCCGCGCA GCCTCGTCAC CTCCTATACC GTCGATGGTC TGGGCAATAC CACCCAGCAG
CAAAGCCCCG ATACCGGCAC TACTAACGCC ACTTACGACG CGGTTGGAAA TCTCACAAGC
CGAACGGATG CGAGAGGCAA AACCACCACC TATAGCTACG ACGCACTGAA TCGCCCGACG
CGCGTGGCTT ATGCCAGTGG CACCCCCACG GTCCTGGAAT ATGACGGTGG CACCAGTCCG
CAGCCGACCG ACATCGGCCA GCTGACGCGC ATGACCGATG AGTCGGGCAG CACGCGCTTC
CAGTACAACG GCTTCGGCAA CCTGCTGCAG AAGACGCAGA CCACCACGGC CAACGGCGTC
GCCAAGGATC AAACGATTGC GTATGCCTAC GGCACCAGTG GCAGCAGCAC CGGCCACGCG
GTCAGCTTGG CCTATCCGAG CGGCAGCGTG GTGGGCTACA GCTACGATAC CGGCGGCCGC
ATCGCCGGGC TGACGCTGAC CACCGCCAAT GGCAGTGTCA CGCTGCTGTC GAACATCCAG
TACCAGCCGT TCGGCAAGCC GAAATCATGG ACGTGGGGCA ACGGCACGGC CTACGTGCGC
AGCTTCGACC TGAGCGGCCG ATTGACCCAG TTCCCGCTGG GCGCAACCAC TGGTACCGGC
ACCACACCGA ACGGCCTGTC GCGCACGGTC AACTACGACG CGGCCTCGCG CATCTCCGCG
TACACGCACA CCGACACGAG CGGCAGCACC GGCAGCAGCA CGGCGACGGC GGCCAACCAG
ACCTTCGGCT ATGACGACCA GGACCGGCTG ATCAGCTACC TGCCAGCCAA CAGCAGCCAG
AGCTACAGCT ACGACGCCAA CGGCAACCGC ACGGGCCAGA CCATCGGCGG CGCCAGCTAC
ACGCAGACCG TCGATCCGGC TAGCAACCGG CAGACGGCGA GCACGGGGCC GGCAGCGACC
ACGAACAGCT ACGACGCGGC GGGCAACCAG ACGGGTGACG CCACCACCAC GTACAGCTAC
AGCGACCGGG GCAGGCTGGC GAGCGTCAGC AAGAACGGCA CCACGACCAG CTACCTGTAC
AACGGGCTGG ACCAACGTGT GCTCAAGAGC GGCAGCAACG TTCCGACGGG CGCGACCCGC
TACGTCTACG ACGGAGCAGG CCACCTGATC GGGGAATACG ATCAGTCGGG CAACGCGATT
GAGGAGACGG TGTACCTGGA CGACACGCCC GTCGCGACGG TCAAGAACGG CACGCCGTAC
TACATCTATG CGGACCAGAT CGACACGCCG CGGGTGATCA CGGACACCAA CAACCTGATG
GTGTGGCGAT GGGATCAGGC CGATCCGTTC GGGGCGACGC TGCCGGATGA GAACCCGACC
AGCCTCGGCA GCTTCACGTA CAACCTGCGC TTCCCTGGGC AAGTCTACGA CGCTGAGACG
GGCAAGCACT ACAACGCGAA CCGGGACTAT GATCCGGCAG GCGGGCGGTA TGTGCAGTCC
GATCCGATCG GGCTCAACGG CGGGCAACCA TCGACGTACG CATATGTCGA CAGTAACCCA
ATCTCTGTTA TTGACCCCGA CGGGCTGAAG AAAATCATCC TCCTACCGCC GACGGACCCT
AACTATCCTG CAGCCGTGAA TGCTGCCGAT GACCCCAACC TGTGCATCGT GATTTCGCAC
GGCAGTAATC AGACTGTGAA TCACATGAAT GCGCAGCAGC TCAACAAAAG GCTGGCCATA
CTTGGATGCA AGCCAAAACA ACCGGTCAAG CTTGATGCTT GCCGAACTGG CCAAGGCGAG
AGCTCCATCG CTGAGCAATT GGCGCGGCTT CGAAAGGCAA CTGTCATTGC GCCAGACAAC
AGAACCTGGA CTACGCCGTG GAACACGAAC ATAGACCGCC CGTATCCCCC AGTGAGCGAT
GACCACGATT CGTTCTGGAA CACCATACCG GACTGGAGTA AGCCAGGAAA TTGGCGGACA
TTTGGGCCAG CGGGCCCTCA ACCTTGA
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| Protein sequence | MGVKRFIEKQ RWAAALSTGA EREPGLTGRH TPLYRAVSAA ALLTLSAQML AQTQVSTTQY
AYDMVGNLTQ ITDPRGLVTT LTYDALGRRT KVQGPPATPG GAVPTAVFNY DGQDRVRQIT
DPRSLVTSYT VDGLGNTTQQ QSPDTGTTNA TYDAVGNLTS RTDARGKTTT YSYDALNRPT
RVAYASGTPT VLEYDGGTSP QPTDIGQLTR MTDESGSTRF QYNGFGNLLQ KTQTTTANGV
AKDQTIAYAY GTSGSSTGHA VSLAYPSGSV VGYSYDTGGR IAGLTLTTAN GSVTLLSNIQ
YQPFGKPKSW TWGNGTAYVR SFDLSGRLTQ FPLGATTGTG TTPNGLSRTV NYDAASRISA
YTHTDTSGST GSSTATAANQ TFGYDDQDRL ISYLPANSSQ SYSYDANGNR TGQTIGGASY
TQTVDPASNR QTASTGPAAT TNSYDAAGNQ TGDATTTYSY SDRGRLASVS KNGTTTSYLY
NGLDQRVLKS GSNVPTGATR YVYDGAGHLI GEYDQSGNAI EETVYLDDTP VATVKNGTPY
YIYADQIDTP RVITDTNNLM VWRWDQADPF GATLPDENPT SLGSFTYNLR FPGQVYDAET
GKHYNANRDY DPAGGRYVQS DPIGLNGGQP STYAYVDSNP ISVIDPDGLK KIILLPPTDP
NYPAAVNAAD DPNLCIVISH GSNQTVNHMN AQQLNKRLAI LGCKPKQPVK LDACRTGQGE
SSIAEQLARL RKATVIAPDN RTWTTPWNTN IDRPYPPVSD DHDSFWNTIP DWSKPGNWRT
FGPAGPQP
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