Gene RS04690 details

Gene Information

• Locus tag: RS04690
• Symbol: RSp0178
• ID: 1222309
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 222745
• End bp: 223527
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637240037
• Product: hypothetical protein
• Protein accession: NP_521739
• Protein GI: 17548399

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000667463
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCAAT ACCTCTACCA CATCACCACC ACGGCCGTGG CGCGCATCAT CCGCACCAAG 
GGGCTGACGC TGGCCGCGCA TCCGGAGGCA CTCGGCCGGC CGGTCGCGCG TCGCCACGGG 
GCGTTCGAAG TGAACCGCGC CGCGCAGGAG CCCGGCCGCC AGGTCAATCG GCTCAAGGCC 
TATCTCAAGA AGGGCCTGGA GGCGGGGTAT TCGCTGGACC AGATCCGCAC CGGCCAGCGC 
CCCTTCACGC CGATTCCCGT GGTGCCCGCG GGCAACCGCG ATGACGAGCA GGTGGAGATC 
ACCCGCGTCG AAGAGGCCGA GGTCAAGGCT TTCCTGGCCG CGCTGGGGAC GCCGGCCAAC 
AAGCCGGGCC GTCTGACGAT GCCGCTGAGA ACGCTGGGCG AGCACGCCGA CGACATGCTG 
CGCACCCGCA AAGCCAACGC GCTGTGCCGG CTGGCGGTCC ATACCGTCTC GCTCGAATAC 
GCCATCGAAG AGGGGATGAC GTCGCGCCAC GTCTATTTCT CGCGGCCCGA GCGTGCGTCG 
GATTGCTACA GCAGCTACAC GCGGCAGCAT GGCGGCGCCG CGCAATGCTC GGTGCTGCGC 
GTGTCCCGCA TGGCCGCGGC GCCGCTGCTG GACGATCCGT CGGACTTCCG CGCGGTCATG 
ACGCAGCGCC GGATCTTGCC GCAGCAGATC GAGATCTGGC GCGCCCCGTC GGACGTGCTG 
TTCACCAACG CCGACGATCG GGCCGCAGCC GGCAACTGGA TGCCCTTGAC GCAGTGGAGC 
TGA 

 

Protein sequence

MTQYLYHITT TAVARIIRTK GLTLAAHPEA LGRPVARRHG AFEVNRAAQE PGRQVNRLKA 
YLKKGLEAGY SLDQIRTGQR PFTPIPVVPA GNRDDEQVEI TRVEEAEVKA FLAALGTPAN 
KPGRLTMPLR TLGEHADDML RTRKANALCR LAVHTVSLEY AIEEGMTSRH VYFSRPERAS 
DCYSSYTRQH GGAAQCSVLR VSRMAAAPLL DDPSDFRAVM TQRRILPQQI EIWRAPSDVL 
FTNADDRAAA GNWMPLTQWS