Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03923 |
Symbol | RSp0556 |
ID | 1222863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 698793 |
End bp | 699341 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637240416 |
Product | hypothetical protein |
Protein accession | NP_522117 |
Protein GI | 17548777 |
COG category | [S] Function unknown |
COG ID | [COG4275] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0504923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCCGTG GCTGTATCGT CGTAAAGGAC CCGGAGGCCG CTATGCAATG GATCACGCGT GAACGCCCCA AGATCGACCG GATCGCTTGT CCCTGGCTCA TCACCCGGTT CATCGATGCG ACGCCGGCAT TCCTCTACGT GCCGCCCGGC GACGTCCTGC GCATCGCTCG CGAGACCGGT GCGATTCCGT ATGACATCCT CGGCGTGGAG CTCACGCACG TCGGCGAACT GTGCAGCTTC GATGCCTTTC TGGACAAATA CCATCTGGAC GGCGATCCGG CCCTGCAGCA ACTGGCGAGC ATCGTGCGCG GCGCCGATAC GTCGCGGCTG GATCTGACGC CGCAGTCCGG CGGGCTGTAC GCGATCTCTC TCGGGCTATC GCATCTTTTT GCCGACGATC ACGAGATGCT CAGGCACGGC CTGGTGATGT ATGACGCGCT CTTCGCGTGG TGCCGGTTCT GTCAAGGCGA GACGCACGAA TGGCCGCCAA GGATGGACGT CGGGGGCATC CCGCTATCAC CCGCGACGGG CCAGCCGGGA ACGCATTGA
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Protein sequence | MFRGCIVVKD PEAAMQWITR ERPKIDRIAC PWLITRFIDA TPAFLYVPPG DVLRIARETG AIPYDILGVE LTHVGELCSF DAFLDKYHLD GDPALQQLAS IVRGADTSRL DLTPQSGGLY AISLGLSHLF ADDHEMLRHG LVMYDALFAW CRFCQGETHE WPPRMDVGGI PLSPATGQPG TH
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