Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03723 |
Symbol | RSp0243 |
ID | 1222374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 314699 |
End bp | 315841 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240102 |
Product | hemin transport protein |
Protein accession | NP_521804 |
Protein GI | 17548464 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3720] Putative heme degradation protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000267983 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.178446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACC CGCCCGCCCC TTCCCTGCCC ACCGGCACGC CGGACGAACG CATCGCCCGC GCGGCCCGAC TGCGCGAGCG CCACCGCGCC CTGCTCGCCG AACGCAGCCT GCGCCAGCGC GATGCCGCCG CCGAGCTGGG CGTGTCCGAA GGCGAACTGG TCGCCGCGCG TGTCGGCGCC GATGTCACGC GGCTGCGTGC CGGCGAGGAC GGCCACTTCA TCGGCCTGTT CGAGCAGCTC GGCGCGCTGG GCCGCGTGAT GGCGCTCACG CGCAATGCCG CCGCCGTGCA TGAGAAGGAC GGCACCTTCA CCAGCCTGAG CCACACAGGC CTGGTCGGGC TGGCGCTCGG CGCGGAGATC GACCTGCGCA TGTTCTACGC GCACTGGGCA CATGCCTATG CCGTGACCGA CACCTCGCCG CGCGGCACGC TGCGCAGCCT GCAGTTCTAC GATGCCTGCG GCGAGGCGGT GCACAAGGTC TACCTGCGCG AGCACAGCGA CCACGCCGCC TGCGACCGCC TGGTGGCGCA ATGGCGCGCC GATGACCAAG CGCCCGGCGA CGCCATGCAG GCGCGCCCCG CCCCGGACGC GCCGCGCCCG GACAGTGCCA TCGACGTGCC CGCGCTGCTG TCCGCATGGG AAGCGATGAC CGACACGCAC CAGTTCTTCG GCCTGCTCAA GGCGCACGAG GTGGCGCGCA CGCAAGCGCT GCGGCTGGCC GAAGGGCGCT TCACCCTGGC CGTGGCGCCG ACTGCGCTGA GCGCGGTGCT GGAGGAGGCG GCCGCCACCG GCCTGCCGAT CATGGTGTTC GTCGGCAACC GGGGCATGGT GCAGATCCAC ACCGGACCGG TCACGACCGT GCGGCGGCTC GACGGCTGGG TCAACGTGCT CGATCCCGGC TTCAGCCTGC ATGTGCGCGG CGACCTGATC GACCGCGCCT GGGTGGTCTG CAAGCCGACC TCGGACGGCG TGGTGACCGC GCTCGAACTG TTCGATGCGC AAGGAGAGAC CATCGCCATG CTGTTCGGCG CACGCAAGCC GGGTGAGCCG GAGCGGCCCG CCTGGCGCGA CCTGATGCGC CGCTTGCTGG GCGAGCGGTC GGCATGCCTG CCGCTGGGTT GCGCGATGGC GGGTTCGGCA TGA
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Protein sequence | MMNPPAPSLP TGTPDERIAR AARLRERHRA LLAERSLRQR DAAAELGVSE GELVAARVGA DVTRLRAGED GHFIGLFEQL GALGRVMALT RNAAAVHEKD GTFTSLSHTG LVGLALGAEI DLRMFYAHWA HAYAVTDTSP RGTLRSLQFY DACGEAVHKV YLREHSDHAA CDRLVAQWRA DDQAPGDAMQ ARPAPDAPRP DSAIDVPALL SAWEAMTDTH QFFGLLKAHE VARTQALRLA EGRFTLAVAP TALSAVLEEA AATGLPIMVF VGNRGMVQIH TGPVTTVRRL DGWVNVLDPG FSLHVRGDLI DRAWVVCKPT SDGVVTALEL FDAQGETIAM LFGARKPGEP ERPAWRDLMR RLLGERSACL PLGCAMAGSA
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