Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03192 |
Symbol | RSp1248 |
ID | 1223560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1585529 |
End bp | 1586647 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637241113 |
Product | lipoprotein signal peptide |
Protein accession | NP_522809 |
Protein GI | 17549469 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGC GTTCTACCCT GGCCGCCATG GCAGCGGCCG CCGCATGCTG CATGGGCCCC GCGCTTGCCG CTAGCGAGCC TGCCCCCTAC CGCGTGGGCC AGACCGTACG CGAGTTCCGC CCCGATGCGC CCCGCCATTG GCGCGGCGCA CAAGCCCATG CCCTGCTGAC CACAGTCTGG TACCCCGCCG GCCTCGATGC GCCGGAAGTA CCGCACGACA TCGGCGCGCC GGGCCGCCGT ACCTTCCAGG GCCACCCCTT GGCCGACGGC GCGCCGGTAT CGGCCGCCCG CTCAACGTAT CCGCTGCTCC TGCTGTCGCA CGGCACCGGC GGCACCGCCG ACAGCCTGGA CTGGCTGGCC GCCGCGCTGG CAGCGCAGGG CTACATCGTG GCGGGTGTCG ACCACCCCGG CAACAGCGCG CAGGCGCCGC TGACGCGCGA AGGCTTCCGG CTCTGGTGGG AGCGGGCCAC CGACCTCAGC CAGGTGCTCG ACGGCCTGCT GGCCGATCCG GCGCTCGGCC CCCGGATCGA CGCGGACCGG ATCGGCGCGG TGGGCTTCTC GCTGGGCGGT TATACGGTGC TGGAGCTGGC CGGGGCGCGC ACCAACCTGC CGGCGTTCGA GCGCTTCTGC GCCTCGCCCG ACGCCGATGC GATCTGCCAT CCGCCCGAGA TGCGTAACGT TCAGGACGAT GCGCAGCCAG CGGGTGCACC ATCGCCGGAA ACCGCCGCAT CGCTGGCGCG CGCCGGTGCG TCGTACCGGG ACCCGCGCAT CCGTGCCGTC TTCGCCATCG CGCCGGCACT GGGCATGGCC TTCGACGACA CCGCGTTCGC GGAGGTCCGG ATCCCGGTGG CACTGATTGC CGGCTCCGCC GACATCACGG CACCGGTGGA GACCAACATC CGCCGCATCG GCAAGCTTCT GCCCGGCGCC AGCACGGAAC TCGTACCGGG CGCGACGCAC TACACCTTCC TCGACACCTG CCTGCCGCCC CTGGTCGAGC GCCTGGCCCC GATCTGCAAG GACGCCCCCG GCGTCGACCG CGATGCCGTG CATGCGCAGA CGATCACGCG TGCGCTCGCG TTTTTCGCGG CATCGCTGTC GGCTTCACGG GTGCCTTGA
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Protein sequence | MLLRSTLAAM AAAAACCMGP ALAASEPAPY RVGQTVREFR PDAPRHWRGA QAHALLTTVW YPAGLDAPEV PHDIGAPGRR TFQGHPLADG APVSAARSTY PLLLLSHGTG GTADSLDWLA AALAAQGYIV AGVDHPGNSA QAPLTREGFR LWWERATDLS QVLDGLLADP ALGPRIDADR IGAVGFSLGG YTVLELAGAR TNLPAFERFC ASPDADAICH PPEMRNVQDD AQPAGAPSPE TAASLARAGA SYRDPRIRAV FAIAPALGMA FDDTAFAEVR IPVALIAGSA DITAPVETNI RRIGKLLPGA STELVPGATH YTFLDTCLPP LVERLAPICK DAPGVDRDAV HAQTITRALA FFAASLSASR VP
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