| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03098 |
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| Symbol | RSp1445 |
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| ID | 1223757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1817641 |
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| End bp | 1819311 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241308 |
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| Product | activation/secretion signal peptide protein |
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| Protein accession | NP_523004 |
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| Protein GI | 17549664 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.604865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.89886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCACCT ATGCCCGCCT GACCCTGGAG AGTGCGCTGC TGCTTCTGAT GGCACCCGCC
GTCTGCGCGG AGCTTCGGCC CGACGCGGGC GACGTCGCAC GCGATACGGC GCCTGCGCAG
GTCCTGGGCA TGCCCGCCGG AGGGACGACC CTGCCCGGCA CCGCTGGCGA TCAGGGTGAC
GGCAGCGTGC CGCAGGATGC CACCCCCATC CCCGTGCGCC ACGTGCGCGT GACAGGGGCA
CGGCTGTATC CGACCGCAGT GCTGGAGGCG CTGGTCGCCG ACCTGAACGG CGGCACGCGC
ACGCTGGCGG ACCTGTCGCG CGGCGCGGCG CGCATCACCC GCTTCTATCG CGCGCAGGGC
TGGCCGCTGG CAAGCGCCTA TCTGCCGGCC CAGTCGATCC GGGACGGCCA GGTCGAGATT
CGCGTCATGG AGGGCACGTT GTCCGGCGTG CGCATCCAGG CCGATCCGCA AAGCCGACTA
CGCGCCAGCG TCATCGACGC CCATCTGGCG GCGCTCGAGC ACGATGCGCC GCTCAACCAG
GCGCAGGTCG ACCGCGCATT GCTGTTGCTG TCCGATCTGG CCGGCGCCAG CCTGAACGCC
AGTCTGGCTG CCGGCGCGCG TCCTGGCCAG ACCGAACTCG TGATCGGCAG CCGGGCCGCC
CCGCTGACAA GCGGCCGCCT GGAGGCCGAC AACTACGGTT CGCTCTACAC GGGACGGACC
CGCGTTGGCG GAACACTCAA CGTCAACAGC CCCACGGGCC ATGGCGAGCA GATCAGCGCG
CGCATGCTGG CGAGCGACGA CCACCTCTAT TACGGCAGAC TGTCCGTGCA GATGCCGCTG
GGGAGTCGCG GCCTGAGCAC CGGCGCCGGT TTTACGCACA CGCAGTACGT ACTGGGCTCG
GCCTTCACGC AGCTCGATGC GCGCGGGCAG GCGGACATCG CCGAATGGAA CCTGACCTAC
CCTTTCGTCC GTAGCGTTGC GCACAACGTG TTTGGACAGT TCAGCGCGGA ACACCGTCGC
ATCTCCGACC AGGTGGGTGC CTCCGGCACC GAGACCGGCA AGCGGGCCGA CCACTACAGC
GCCAACCTGC TGTACAGCGG CCGCGATGGC GTGGGCGCCG GAGCCGATAC CCAGGCGGCG
CTGCGCATCG GAACAGGCAC GCTGGGCATC GATTCGCCCA CCGCCGCGCG CATCGATGCA
GTGGGCGCGC AGACGGCCGG CCGCTACAGC ACGCTCAATC TCGATCTGCA GCGCAACCAG
AGGCTGGGCG GCCCGTGGGG CCTGCTGCTT GTCCTGCGCG GCCAGGCGGC ATCGCGCAAC
CTGGACTCCT ACCAGAAGTT CGTGCTGGGC GGTGCCAATG GCGTGCGTGC CTACCCGGCC
GGCGAGGCAG CCGGCGACGA AGGCTGGCTG GCCAGCGGCG AACTGTATTA CGCGGCAAAC
CCGTTGTGCA TCCCCAGCGT GTTCTATGAC GCCGGCGGCA TCGGGATCAA CAGGCATCCC
TATCTGGCCA CCGCCAACCG GCGTGTGCTG CACGGCTATG GCATTGGCCT GCGAGGCAGT
CACCGGACAT TCGACTGGAG TGCCAGTCTC GCCTTCCGGG GTTCCGAACC CACGCAGACG
GAACCGGATC GACGTACACG CCTTTGGGTA CGGCTCGGAT GGGCGTTCTA G
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| Protein sequence | MRTYARLTLE SALLLLMAPA VCAELRPDAG DVARDTAPAQ VLGMPAGGTT LPGTAGDQGD
GSVPQDATPI PVRHVRVTGA RLYPTAVLEA LVADLNGGTR TLADLSRGAA RITRFYRAQG
WPLASAYLPA QSIRDGQVEI RVMEGTLSGV RIQADPQSRL RASVIDAHLA ALEHDAPLNQ
AQVDRALLLL SDLAGASLNA SLAAGARPGQ TELVIGSRAA PLTSGRLEAD NYGSLYTGRT
RVGGTLNVNS PTGHGEQISA RMLASDDHLY YGRLSVQMPL GSRGLSTGAG FTHTQYVLGS
AFTQLDARGQ ADIAEWNLTY PFVRSVAHNV FGQFSAEHRR ISDQVGASGT ETGKRADHYS
ANLLYSGRDG VGAGADTQAA LRIGTGTLGI DSPTAARIDA VGAQTAGRYS TLNLDLQRNQ
RLGGPWGLLL VLRGQAASRN LDSYQKFVLG GANGVRAYPA GEAAGDEGWL ASGELYYAAN
PLCIPSVFYD AGGIGINRHP YLATANRRVL HGYGIGLRGS HRTFDWSASL AFRGSEPTQT
EPDRRTRLWV RLGWAF
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