Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03096 |
Symbol | RSp1447 |
ID | 1223759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1821120 |
End bp | 1822280 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637241310 |
Product | putative Leu/Ile/Val-binding lipoprotein transmembrane |
Protein accession | NP_523006 |
Protein GI | 17549666 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0735365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.368181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAG ACCGGTTGTT GAAGCGCTGG CTGGCGAAAC TGGCTGCTGT TGTACTGTTC TGGACGGGGT GCCACGCGCA TGCGCAGAAC GGTGTCACGG CCGACAGCAT CATCATCGGC CAGTCGGCCC CATTGAGCGG GGCGGCGGCA CAGCTGGGCC AGCAGCTGAG CCTGGGTGCC CGGCTGTATT TCAACGCTGT CAATGCGGCG GGCGGAATCC ACGGCCGCAA GATCGATTTC AAGGTATTGG ACGATGGGTT CGATGCCGAC ACGAGCGCCC GCAATACCAG GATGCTCATC AACGACGCCA AGGCGTTCGC GCTGTTCGGC TATGTCGGCA CGCAGAGCAG CATGGCGGCG CTCAAGGTTG CCAATCCGGC GGGCGTGCCG TTCTTTGCGC CATACGCCGG CGCGCAGTCC TTGCGCGAGC CCTTCGCCCG CAACGTCTTC CACGTGCGTG CCGGGTTCAA CGACGAAACC GCGGCGATCA TTCAACAGAT CAGGGCCGTG GGCCAGAAAC GCATCGCCGT GATCTACAAC GACGACGCGT ATGGCAGGGC CGGACTGGAC GGCCTCCGGC ATGCGCTGGC CCTTCCGGCC AATGCAGGTC TGGCGCTGGT CGGCCAGGCG AGCGTGGCGC GCTACACCAC CGATATCAAG GCAGTGCTCA GTAGCGTGTT GGCGCAGAAG CCGGAGGTCA TCGCCGTTGT CTGCGGCTAT CAGACGGTGG TGGCGCTGGT GAGCGAGGCA CAGGTTCAAG GCTATGCCGG CCAGTTCTAC AACCTGTCGC TGGTCGGCTC CAAGATGCAG ACAAAGGAAC TGGGCACGAC CGGAAGCGGT GTTGTGATCT CCCAGGTCAT GCCTTATCCG CGCAGCGTAT CGACGCCGAT CGTGCGCGAA TACCAGAAGC TGCTCAAGGC CAATGGCATC ACCGACTTCG ACTATTGCAG CCTGGAGGGC TATATCGCTG CACGCGCGCT CGTTGATGGG CTCAGAGGGG CGGGCCGCGA TCTCACGCGC GACAAGTTCA TCCGGGCCCT CGAAGCCCTG GGCAACCACG ACATGGGCGG TTTCGTGCTC AACTTCTCGC CAAGCAATCA CCTCGGCTCG AGCTTTGTCG AAATGACGAT CGTGAGCGCG CGGGGGCAGG TGATCCGCTG A
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Protein sequence | MAQDRLLKRW LAKLAAVVLF WTGCHAHAQN GVTADSIIIG QSAPLSGAAA QLGQQLSLGA RLYFNAVNAA GGIHGRKIDF KVLDDGFDAD TSARNTRMLI NDAKAFALFG YVGTQSSMAA LKVANPAGVP FFAPYAGAQS LREPFARNVF HVRAGFNDET AAIIQQIRAV GQKRIAVIYN DDAYGRAGLD GLRHALALPA NAGLALVGQA SVARYTTDIK AVLSSVLAQK PEVIAVVCGY QTVVALVSEA QVQGYAGQFY NLSLVGSKMQ TKELGTTGSG VVISQVMPYP RSVSTPIVRE YQKLLKANGI TDFDYCSLEG YIAARALVDG LRGAGRDLTR DKFIRALEAL GNHDMGGFVL NFSPSNHLGS SFVEMTIVSA RGQVIR
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