Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03088 |
Symbol | RSp1455 |
ID | 1223767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1829419 |
End bp | 1830159 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637241318 |
Product | two-component response regulator transcription regulator protein |
Protein accession | NP_523014 |
Protein GI | 17549674 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.25081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGTATC CGGCGCGCCA TACTGCTGCC ATGACCGATC CTGACCGCAC TTCCATGACT CGCGTGCTGC TGGTCGACGA CGACGCCGAA CTGACCGGGA TGCTGGTGCA GTATCTCGCG CACGAGGGCT TTGCCGCCGA GGTCGCGCAT GACGGCGAAG CCGGCGTGGC CCGCGCGCTC TCGGGGGACT TCGCCATCGT GGTGCTCGAT GTGATGATGC CGCGCCTGTC GGGCATCGAC GCATTGCGCC GCATCCGGGC CGCCAGCCAG GTGCCGGTCG TCATGCTGAC GGCGCGCGGC GATAACATCG ATCGCATCTC CGGCCTGGAT CTCGGCGCGG ACGACTACGT CCCCAAGCCC TGCACGCCGG GCGAACTCGT CGCCCGCCTG CGCGCCATCC TGCGCCGTAC CTCGGGTGCC GATGCGGGCG CCGCCGCCGG GGCGATCCAC GCCGGACCGC TCGCGCTGTG GCCCGCCAGC CGGCGCGCCA CCTGGCTGGG CAGCGCACTG GAATTGACGG GCACCGAGTT CAGCCTGCTC GAAGTCCTGG CACGCCATGC GGGACGGCTG GTCAGCAAGG AAGACATCTC GCTGCAGGCC TTCGACCGGC CGCTGGCGCG TTTCGATCGG CGCATCGACG TGCATATCAG CAGCATCCGC CAGAAGCTCG GCCAGCGTCC CGATGGGCAG CCGTGGATCG TCAGCGTGCG CGGCATGGGC TATCAACTGC TTGCGGACTG A
|
Protein sequence | MRYPARHTAA MTDPDRTSMT RVLLVDDDAE LTGMLVQYLA HEGFAAEVAH DGEAGVARAL SGDFAIVVLD VMMPRLSGID ALRRIRAASQ VPVVMLTARG DNIDRISGLD LGADDYVPKP CTPGELVARL RAILRRTSGA DAGAAAGAIH AGPLALWPAS RRATWLGSAL ELTGTEFSLL EVLARHAGRL VSKEDISLQA FDRPLARFDR RIDVHISSIR QKLGQRPDGQ PWIVSVRGMG YQLLAD
|
| |