Gene RS03088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS03088 
SymbolRSp1455 
ID1223767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1829419 
End bp1830159 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID637241318 
Producttwo-component response regulator transcription regulator protein 
Protein accessionNP_523014 
Protein GI17549674 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.25081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTATC CGGCGCGCCA TACTGCTGCC ATGACCGATC CTGACCGCAC TTCCATGACT 
CGCGTGCTGC TGGTCGACGA CGACGCCGAA CTGACCGGGA TGCTGGTGCA GTATCTCGCG
CACGAGGGCT TTGCCGCCGA GGTCGCGCAT GACGGCGAAG CCGGCGTGGC CCGCGCGCTC
TCGGGGGACT TCGCCATCGT GGTGCTCGAT GTGATGATGC CGCGCCTGTC GGGCATCGAC
GCATTGCGCC GCATCCGGGC CGCCAGCCAG GTGCCGGTCG TCATGCTGAC GGCGCGCGGC
GATAACATCG ATCGCATCTC CGGCCTGGAT CTCGGCGCGG ACGACTACGT CCCCAAGCCC
TGCACGCCGG GCGAACTCGT CGCCCGCCTG CGCGCCATCC TGCGCCGTAC CTCGGGTGCC
GATGCGGGCG CCGCCGCCGG GGCGATCCAC GCCGGACCGC TCGCGCTGTG GCCCGCCAGC
CGGCGCGCCA CCTGGCTGGG CAGCGCACTG GAATTGACGG GCACCGAGTT CAGCCTGCTC
GAAGTCCTGG CACGCCATGC GGGACGGCTG GTCAGCAAGG AAGACATCTC GCTGCAGGCC
TTCGACCGGC CGCTGGCGCG TTTCGATCGG CGCATCGACG TGCATATCAG CAGCATCCGC
CAGAAGCTCG GCCAGCGTCC CGATGGGCAG CCGTGGATCG TCAGCGTGCG CGGCATGGGC
TATCAACTGC TTGCGGACTG A
 
Protein sequence
MRYPARHTAA MTDPDRTSMT RVLLVDDDAE LTGMLVQYLA HEGFAAEVAH DGEAGVARAL 
SGDFAIVVLD VMMPRLSGID ALRRIRAASQ VPVVMLTARG DNIDRISGLD LGADDYVPKP
CTPGELVARL RAILRRTSGA DAGAAAGAIH AGPLALWPAS RRATWLGSAL ELTGTEFSLL
EVLARHAGRL VSKEDISLQA FDRPLARFDR RIDVHISSIR QKLGQRPDGQ PWIVSVRGMG
YQLLAD