Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03074 |
Symbol | RSp1470 |
ID | 1223782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1849343 |
End bp | 1850485 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637241333 |
Product | putative transcription regulator protein |
Protein accession | NP_523029 |
Protein GI | 17549689 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA CGTACTCGAA CGACCCGCTG CTGCTCAACC TGTACCGCTG CTGCACGGCC CCCGGCGGAT GGCAGGCGGT GCTCGACCGG CTGTGCGACG AGGTCGGCGC GCACTCCGCC ATCATGCAGG CCATTGCTTT CGCGGATGAC CACCAGGGCC GCACGTACTG GTGCGCGCAC GATTCCCGGA CCGACGTGAA TGCCTACCGG GCGCTGATCT CCGACGCCAA CAACCCGCGC ATGGACCGCC GGCGCGGCTT GCCGGTCATC GGCCGGTTCG TCGGCGACGA ACAGCTGTTC ACCAGCCGCG AAGACCTCCG CCAGCAGCAG CGGCTGCAGC GGCAGCTGGC CGACCTGGGC TTGGGGCGCT TTCTCGGCGC GCTGCTGCCG ATCGGCGGCG GCCGCTTCAT GGCGATGGTG CTCCACCGCC CGGCCGGCAA CGACACCGCC TTCGGCGAGG CCGACCAGCA GCGGCTTGCC GGCCTGCTGC CCCACTTCGG CCAGGCCGCC GAGCTCAGTC TGTCCGTGCA CGGCGAGCGC AAGCTTGAGC AGATCCTCAG CGCCTGCCTG GACCGCTGGC AATGCGGCCT GGTCGTCTGC GATGCCGACG GCCGGGTGCA ATGGATGAAC CGCCCGGCGC AGGACCGCAT CGCGCGCCAC GGTGCGCTGC ACCTGCGCGA CGGCCTGCTG CACGCCCACG GCGACAAGGC GGCCCGGCTG CGGCACGCGC TGATGCCGCG CAGCATCGCC CACGGCCGGG CGACCTTCCT CACGCTCGAT CACGCCGCCC ACCGGCTGCA CCTGGCCGTG CAGCCGCTGA CGCGCGTCGA CGGCATCGCC GATGCCGGCG GCGCGCTCGT CATGATCAGC GACGGCAACC TCGCTGGCGA GATCCCGGCC GCGGCGCTCG CCGCGCTGTT CGACCTGACC GAGGCCGAAT CCCGGCTGGC CAGCGCGCTG GTGCAGGGCG ACACGCTGGA GCAGTATGCA CAGCGCCGCG GCGTGTCGAT CGGCACGGTG CGCTATCAGC TCAAGCAGGT GCTCTCGAAG ACCGGCACCA ACCGGCAATC CGAGCTGATG CGCAAGGTGC TGTGCTCGGC CGCGGCGCAT GCGGCGGGCT TCCAGTCGGC CAGCATGCAC TGA
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Protein sequence | METTYSNDPL LLNLYRCCTA PGGWQAVLDR LCDEVGAHSA IMQAIAFADD HQGRTYWCAH DSRTDVNAYR ALISDANNPR MDRRRGLPVI GRFVGDEQLF TSREDLRQQQ RLQRQLADLG LGRFLGALLP IGGGRFMAMV LHRPAGNDTA FGEADQQRLA GLLPHFGQAA ELSLSVHGER KLEQILSACL DRWQCGLVVC DADGRVQWMN RPAQDRIARH GALHLRDGLL HAHGDKAARL RHALMPRSIA HGRATFLTLD HAAHRLHLAV QPLTRVDGIA DAGGALVMIS DGNLAGEIPA AALAALFDLT EAESRLASAL VQGDTLEQYA QRRGVSIGTV RYQLKQVLSK TGTNRQSELM RKVLCSAAAH AAGFQSASMH
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