| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03043 |
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| Symbol | RSp1498 |
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| ID | 1223810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1878850 |
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| End bp | 1881210 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241361 |
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| Product | signal peptide protein |
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| Protein accession | NP_523057 |
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| Protein GI | 17549717 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.117793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.374685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGCAG GATGCGGCAT CGTGCTGGTC ACCCTGCAGA CCGCGCAGGC CGGTGCGCTG
GCGCCGGCAC AGGCGGATCC GGTTGCGCTG CTGGCCGCCG CCCGTCCCGA TGCGCCGCTG
CCCGCCGCTG GCACGGACGA TCTCTACCTG GAGGCCATCA TCAACGGCAC ACCGACCCAC
ACCATCGCGC GACTGCGCTT GCGTGATGGA CGGTTGTCGG CCGCCGCCGG CGAATTGCGC
GCGCTCGGCA TCCGCATCGA CGACCTGCAG CCGGACGCGA ATGGTCTGAT CGCGCTCGAC
GGCGTTGCCG GGCTGCGCTA CACCTACGAG GTCCGCGCGC AGCAGGTTCG CTTCGTCCTG
GACGACGCAC GCCGTGTGCC CGACGTGCTG ACGGTGCACG CGCGTCCGCG CGTGCCGCCC
ACCAGCGGCA CCGGCCTGGT GCTCAACTAC GATGCCTACC TGCAGCCGAC CACGCCGGGC
GGGGACGGCG CAAGCCTGGG GGTGTTCAGC GAGCAACGCT TCTTCCATCC GGGTGGGGTG
TTCTCCAACA GCGGGGTCGC GCTGGCCGCG CGCGGCGCGG ACCGCTACAC CCGCCTCGAG
ACCAGCTGGT CGCACGCGGA CCCCGAGCGG CTGACCACAC TGCGCCTGGG CGACACCGTG
ACCGCGGCGC TGGGCTGGAG CCGCGCGGTG AGGCTGGGCG GCGTGCAGTG GCAGCGCAAC
TTCGATCTGC GCCCGGACCT CGTCACGTAT CCGCTGCCGT TGCTGAGCGC CAGCGCGGCC
GTGCCGACCG CCGTGGATCT GTATGTCAAC AACGTGCGCC AGTTCAGCGG GCAGGCGAGG
GGCGGGCCGT TCGTGCTCAA TGCGGCGCCG GCCGTCACGG GCGCGGGGCA GGCCGTGATC
GTCGTCAAGG ATGCGCTCGG GCGCGACGTG GTGACGTCGG TGCCGCTCTA CATCGATACA
GGGCTGCTGG CTGCGGGATT GTCCGACTAC GCCGTCGAAG CCGGCTTCCT GCGCAACCAG
TACGGTGTGC ACACATTCGA CTACGCGCGG AGTCCGGCGC TCAGCGCGTC GCTGCGCTAC
GGCCTGAGCG GCAGCCTGAC GCTGGAGAGC CACGCCGAGG CCGCGCGCGG GCTCGCCAAT
CTCGGCGCCG GCATGCGCAC CCGCTTGGGG CAGGCGGGCG TGGTCTCGGG GGCGGCATCG
GTCGCGCGGG GCGGCGACGC GTCTGGCGCG CAAGGCTCGC TCGGCTACCA GTACCGCGCG
CCGGGGATCG CGATCGACCT GCAGGGCACG CGCACCTTCG GCACGTACCA GGATTTGGCC
AGCACGGCCG GCGCGCCGTT CTACCGCTCG CTGCTGCGGG GCACGGTGTC GCGCCCGGTC
GGCCGCACCG GCAGCGTCGC GCTCAGCTAT ATCGGCTTGT CGGTTCCGGG CTCGGACCGC
TCGCGCATCG TCTCGCTGTC GTATGCCGCG CTGCTCGGGC GGGATCTTTC GCTGAGCGCC
AGCGCGTATC AGGACTTGGC CGACAGCCGT GCCCGCGGCG TGCTGCTCAC GTTCAGCATG
GCGCTGGGCC GCGACGCCAA CGCCGCCGCG AGCGTCGGCA GCGATCACGG GCGTGCCGAG
GCCACCGTCA GCGCGGTGCG CACGCCCGAC TATGCCGGCG GCTTCGGCTG GCAGCTCCAG
TCGGGCCGGT CCGGCGCGCA GCGCCGCTCG CTGGCGCAGG TCAACTACCG TGGCCGCTAC
GGCGATGCGT TCGCCGCCGT GCAGGAGATC AACGGCCAGG CCAGCACCGC GCTGGACGCG
GCCGGCTCGC TGGTGCTGAT GGACGGCGCG GTGCTGCCGG GCCGCCGCAT CAACGATGCC
TTCGCGCTGG TCACCACCGA AGGCATGGCC GATGTGCCGG TCACTTTCGA GAACCGGCTG
ATGGGCCGCA CCAACGCACA GGGGCACCTG CTCGTGCCCG ATCTCGTCGC CTACGAGAAC
AACCGCGTGG CGATCGACCC GCTGGCCTTG CCGATCAACG CGCGGCTGGC GGCAAGCGCC
GCCACGCTGG CGCCCACCGA CCGTTCGGGC GTGCTGGTGC ACTTTCATGT CGAGACGTTC
CGGGGCGCGC AACTGCGGCT GGTGGACGCA CTGGAGCAGC CGCTGCCGGC CGGCAGCCAC
GCCACCCTCG CGCGAACCGG CGCACGCTAC CCGATCGGCT ACGACGGCCT GGCCTTCATC
GATGCGCTGG AGACCGAGGA CATCGTGCGC GTGGACGACG TGGACCCGCC CTGTGCGGCG
CACGTCGTCT ATCCCGCCGA TGCCGGCGCG CTGCCGACGC TCGGTCCGCT GCGCTGCATG
CCACGGGAGG CGGCGCCTTG A
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| Protein sequence | MAAGCGIVLV TLQTAQAGAL APAQADPVAL LAAARPDAPL PAAGTDDLYL EAIINGTPTH
TIARLRLRDG RLSAAAGELR ALGIRIDDLQ PDANGLIALD GVAGLRYTYE VRAQQVRFVL
DDARRVPDVL TVHARPRVPP TSGTGLVLNY DAYLQPTTPG GDGASLGVFS EQRFFHPGGV
FSNSGVALAA RGADRYTRLE TSWSHADPER LTTLRLGDTV TAALGWSRAV RLGGVQWQRN
FDLRPDLVTY PLPLLSASAA VPTAVDLYVN NVRQFSGQAR GGPFVLNAAP AVTGAGQAVI
VVKDALGRDV VTSVPLYIDT GLLAAGLSDY AVEAGFLRNQ YGVHTFDYAR SPALSASLRY
GLSGSLTLES HAEAARGLAN LGAGMRTRLG QAGVVSGAAS VARGGDASGA QGSLGYQYRA
PGIAIDLQGT RTFGTYQDLA STAGAPFYRS LLRGTVSRPV GRTGSVALSY IGLSVPGSDR
SRIVSLSYAA LLGRDLSLSA SAYQDLADSR ARGVLLTFSM ALGRDANAAA SVGSDHGRAE
ATVSAVRTPD YAGGFGWQLQ SGRSGAQRRS LAQVNYRGRY GDAFAAVQEI NGQASTALDA
AGSLVLMDGA VLPGRRINDA FALVTTEGMA DVPVTFENRL MGRTNAQGHL LVPDLVAYEN
NRVAIDPLAL PINARLAASA ATLAPTDRSG VLVHFHVETF RGAQLRLVDA LEQPLPAGSH
ATLARTGARY PIGYDGLAFI DALETEDIVR VDDVDPPCAA HVVYPADAGA LPTLGPLRCM
PREAAP
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