| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03042 |
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| Symbol | RSp1499 |
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| ID | 1223811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1881268 |
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| End bp | 1881993 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637241362 |
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| Product | putative pili assembly chaperone transmembrane protein |
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| Protein accession | NP_523058 |
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| Protein GI | 17549718 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.168941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.259112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCTTGCGC ACAGCGCCGG CGCCGCGATG CGGTGGCGGC GCGCGTGCGC CTGGCTGGTG
CTGCTGATGG GCACGTTCGC GCCGCTCGCG GCGGGCGCAG CGGCGCTGCA GATTTCACCG
ATCCGGCTCG ACCTTCTCCC GGGGCAAAGC GCCGGCAGCC TCACGCTGCG CAATCGCGGC
ACGCAGCCGC TCAACGCGCA GGTGCGCGTG TTCCGCTGGA CGCAGGATGC CGAAGGCGAC
CGTCTGGAGC CGGCTCCAGC GCTGGTCGCC AGCCCGCCCA TCGTGCAGAT TTCGGGCGAG
GGCGAGCAGC TCGTGCGCGT GGTCCTCACG CAGCCGGCCG CAGGCAACGA TGAGCAGACC
TATCGGCTCC TCATCGACGA ACTGCCCGAG CGCCGCCCGC AGGCGCAGAC AGGCGTGACG
ATGCAGCTGC GCTACTCGGT GCCGGTGTTC GTCAACGCCA GCACCGGGGC ACCGCCCCGG
CTCAGTGCCG CGCTGCGGCG CGATGGCGGG CGGACCCTGC TGGTGGTTCG CAATCCGGAA
GCGCGTCACG CGCAGCTCGC CGACGTGTCG ATCGAATGGA GCGATGGGAC GCGCAGCCCG
CTGACCGCGG GCCTGCTCGG CTATGCCCTG GGCGGCGCGA CGCGCGCCTG GCCGGTGGCC
GACGCGCGCG CGGCCCGCGC CCGTGCCACG GCGGTTGCGG GCCCAGGTCA ACGGTGTCGC
GGTTGA
|
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| Protein sequence | MLAHSAGAAM RWRRACAWLV LLMGTFAPLA AGAAALQISP IRLDLLPGQS AGSLTLRNRG
TQPLNAQVRV FRWTQDAEGD RLEPAPALVA SPPIVQISGE GEQLVRVVLT QPAAGNDEQT
YRLLIDELPE RRPQAQTGVT MQLRYSVPVF VNASTGAPPR LSAALRRDGG RTLLVVRNPE
ARHAQLADVS IEWSDGTRSP LTAGLLGYAL GGATRAWPVA DARAARARAT AVAGPGQRCR
G
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