Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03032 |
Symbol | RSp1509 |
ID | 1223821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1891578 |
End bp | 1892618 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637241372 |
Product | putative periplasmic substrate-binding transmembrane protein |
Protein accession | NP_523068 |
Protein GI | 17549728 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.08661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCCA CCCGACCGCC CGCCCGCCGC CGCGCCCTGC GCCTGACCCT GGCCGCCGCG CTGACCGCCG CGCTCTTCGG CGGCGCCGTC GGCGCGGCGC GCGCGGAGGT GAGCGAAGTC CGCATCTCGC ACGGCTACGG CGTGCTCTAT CTGCCGATCA TGGTGATGGC CAGCGAGCAC CTGCTGGAGA AGCAGGCCAA GGCCGCCGGC CTGGGCGACG TGAAGGTCAG CTACCGCGTG CTGGACGGCG GCAACGTCAT CAACGACGCG ATGCTGTCGG GCGCGCTCGA CATCGCCTCG CTGGGCGTGC CGGGCTTCCT CACGCTGTGG GACAAGACGC GCGGCAGCGC GATGGAGGTG CGCGGCCTGT CCGCGCTCAG CGCGTCGTCG ATGTATCTGA TGACGCGCAA CCCGAACGTG AAGACGCTGG CGGACTTCTC CGACAAGGAC CGCATCGCCG TGCCCGGCAT CAAGACCTCG CTGCCCGCCG TGGTGCTGCA GATGGCGGCC GCCAAGGCCT TCGGCGACAA GCAGTTCAAC AAGCTCGACC CGATCACCGT GCCGCTGCCG CATCCGGACG CCACCGCCGT GATGCTCGCC GGCGGCAGCC AGATCAACAG CCACATGGCG TCGCCGCCGT TCTCGTACGC CGAAGCCGCC GCGCCGGGGC TGCACCGCGT CTTCAACACC GTGGACGTGC TCGGCAACAT CACGCTGGAC ATGACCTACA CCAGCAAGAA GTTCTACGAG GCCAACCCCA AGCTGTCGGC CGCCTTCGTC GCGGCGCTGG ACGAAGCGAA CGCGCTGATC GCCCGGGACA AGGCCAAGGC CGCGCAGATC TACATCGCGC AGTCCAAGGT GAAGAGCTCG CCGGACGAAG TGAAGAAGAT CCTGGACGAT CCGGATTCGC GCTTCACCAC CACGCCGGTG GGCGTGGCCC ACTATGCCGA GTTCATGCAG CGCGTAGGCA CCGTCAAGGG CAAGCCGGCC TCGTGGAAAG ACCTGTTCTT CCCCACGGTG CAGAATCGCC AGGGCTCATG A
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Protein sequence | MQSTRPPARR RALRLTLAAA LTAALFGGAV GAARAEVSEV RISHGYGVLY LPIMVMASEH LLEKQAKAAG LGDVKVSYRV LDGGNVINDA MLSGALDIAS LGVPGFLTLW DKTRGSAMEV RGLSALSASS MYLMTRNPNV KTLADFSDKD RIAVPGIKTS LPAVVLQMAA AKAFGDKQFN KLDPITVPLP HPDATAVMLA GGSQINSHMA SPPFSYAEAA APGLHRVFNT VDVLGNITLD MTYTSKKFYE ANPKLSAAFV AALDEANALI ARDKAKAAQI YIAQSKVKSS PDEVKKILDD PDSRFTTTPV GVAHYAEFMQ RVGTVKGKPA SWKDLFFPTV QNRQGS
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