Gene RS03032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS03032 
SymbolRSp1509 
ID1223821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1891578 
End bp1892618 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID637241372 
Productputative periplasmic substrate-binding transmembrane protein 
Protein accessionNP_523068 
Protein GI17549728 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.08661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCA CCCGACCGCC CGCCCGCCGC CGCGCCCTGC GCCTGACCCT GGCCGCCGCG 
CTGACCGCCG CGCTCTTCGG CGGCGCCGTC GGCGCGGCGC GCGCGGAGGT GAGCGAAGTC
CGCATCTCGC ACGGCTACGG CGTGCTCTAT CTGCCGATCA TGGTGATGGC CAGCGAGCAC
CTGCTGGAGA AGCAGGCCAA GGCCGCCGGC CTGGGCGACG TGAAGGTCAG CTACCGCGTG
CTGGACGGCG GCAACGTCAT CAACGACGCG ATGCTGTCGG GCGCGCTCGA CATCGCCTCG
CTGGGCGTGC CGGGCTTCCT CACGCTGTGG GACAAGACGC GCGGCAGCGC GATGGAGGTG
CGCGGCCTGT CCGCGCTCAG CGCGTCGTCG ATGTATCTGA TGACGCGCAA CCCGAACGTG
AAGACGCTGG CGGACTTCTC CGACAAGGAC CGCATCGCCG TGCCCGGCAT CAAGACCTCG
CTGCCCGCCG TGGTGCTGCA GATGGCGGCC GCCAAGGCCT TCGGCGACAA GCAGTTCAAC
AAGCTCGACC CGATCACCGT GCCGCTGCCG CATCCGGACG CCACCGCCGT GATGCTCGCC
GGCGGCAGCC AGATCAACAG CCACATGGCG TCGCCGCCGT TCTCGTACGC CGAAGCCGCC
GCGCCGGGGC TGCACCGCGT CTTCAACACC GTGGACGTGC TCGGCAACAT CACGCTGGAC
ATGACCTACA CCAGCAAGAA GTTCTACGAG GCCAACCCCA AGCTGTCGGC CGCCTTCGTC
GCGGCGCTGG ACGAAGCGAA CGCGCTGATC GCCCGGGACA AGGCCAAGGC CGCGCAGATC
TACATCGCGC AGTCCAAGGT GAAGAGCTCG CCGGACGAAG TGAAGAAGAT CCTGGACGAT
CCGGATTCGC GCTTCACCAC CACGCCGGTG GGCGTGGCCC ACTATGCCGA GTTCATGCAG
CGCGTAGGCA CCGTCAAGGG CAAGCCGGCC TCGTGGAAAG ACCTGTTCTT CCCCACGGTG
CAGAATCGCC AGGGCTCATG A
 
Protein sequence
MQSTRPPARR RALRLTLAAA LTAALFGGAV GAARAEVSEV RISHGYGVLY LPIMVMASEH 
LLEKQAKAAG LGDVKVSYRV LDGGNVINDA MLSGALDIAS LGVPGFLTLW DKTRGSAMEV
RGLSALSASS MYLMTRNPNV KTLADFSDKD RIAVPGIKTS LPAVVLQMAA AKAFGDKQFN
KLDPITVPLP HPDATAVMLA GGSQINSHMA SPPFSYAEAA APGLHRVFNT VDVLGNITLD
MTYTSKKFYE ANPKLSAAFV AALDEANALI ARDKAKAAQI YIAQSKVKSS PDEVKKILDD
PDSRFTTTPV GVAHYAEFMQ RVGTVKGKPA SWKDLFFPTV QNRQGS