| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02596 |
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| Symbol | RSp1089 |
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| ID | 1223401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1380822 |
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| End bp | 1381448 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240954 |
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| Product | signal peptide protein |
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| Protein accession | NP_522650 |
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| Protein GI | 17549310 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.818766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA AACATCTCCA GATCATCGCC GCCGCGTTGC TGCTGCTCGC CGTCGTGCTC
GGCGTGGTGG CGTGGAAGAA CGCGCATCGC CAGCCGGTGC CCGCTGCGGC GCAGCAGAAC
GAGAACGGCA AGACGCTGTA CCCGGTGGTG GTGACCGTCA AGCCGCTGGA GGCGGGCAAG
CCCATCACGG CGGACCAGGT CGGCGTCGAA TCGTTGCCGA TCAATCCGGC CGATGCCTTC
TCCGAGGTGA ACAAGGTGGT GGGCCGCGAG CCCATCGTGC CGATCGGCAT CGGTGTGCCG
CTGATCGGTT CGCAGCTGTC GTCGGGGCTG GCGCTGCAGG TCGCGCTCGG GCAGCGCGCG
GTGGCGATCA CCGTCGATGA GGTGGTCGGC GTGGGCAACC GCGTGATGCC AGGCGACTAC
GTCGATGTAT TCCTGGTGCT GCGCAAGGAC GGCCAGGAGA TCGACGACAG CAAGGCGCAC
CTGCTGCTGC CGCATCTGCG CGTGCTGGCT TCGGTCCGCT GGCGGTCAAC GAGGGGGAGC
AGAAGCCGGC CGATGCCGGC ACGGCGGCGA CGCGCAGGGT CGACCAGGCC AAGACGGCGG
TGCTGGCGGT GCCGGTGGAA TCCGTGA
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| Protein sequence | MTSKHLQIIA AALLLLAVVL GVVAWKNAHR QPVPAAAQQN ENGKTLYPVV VTVKPLEAGK
PITADQVGVE SLPINPADAF SEVNKVVGRE PIVPIGIGVP LIGSQLSSGL ALQVALGQRA
VAITVDEVVG VGNRVMPGDY VDVFLVLRKD GQEIDDSKAH LLLPHLRVLA SVRWRSTRGS
RSRPMPARRR RAGSTRPRRR CWRCRWNP
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