| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02235 |
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| Symbol | RSp1676 |
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| ID | 1223988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 2088476 |
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| End bp | 2090866 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637241539 |
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| Product | composite two-component sensor kinase and response regulator hybrid transcription regulator protein |
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| Protein accession | NP_523235 |
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| Protein GI | 17549895 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAC CTGTAGTCAG CCATTTCGTG CCGGAGCGCG GCATCACGAG TGCGCCCGGC
CGGTCGTACG GCACCGAGCC GCTCGACGTG TTCTGGGTGG ATGACCTGCT CGACGGGACA
CGCCTGCACG TGAGCGCCGC CGCGCGCCAG CGGTGGGGCA TGTCGCCCGA GACCCTCTGC
GGCCCGCGCG AACACTGGCT TGCCCACGTG CATTCCGGCG ACCATGCCGC GTTGCGGGCG
GCATGGCAGG GGCTCGCGCA GGGCCGCGAT TTCGCGCTGG AATATCGCTG GATCGGCACC
GACGGCGCCG AGCATCGCGT GCGCGAGTGC GGCTACCGCC TGCCGGCGCA GGGCGGGGCA
GCGACGCACG CCGTGGGCGT GGTCGAAGAC ATGACGCAGC GCCTGCGGAC GCTGGCCGAG
CTGACCGAAT CCGAATTCCA GCTGCAATGG CTGGCGGAGA GCATCCCGTT CCCGATCGTG
CAGCTGGGCC CCGACCATTG CATCCGCTTC GCCAACCATG CCTACGCGCA GCGGTTCGGT
CTGCCGGCGG CCGACGTGCT GGGCCGGCAC GTGCGCGAGC TGATGGGCCA CGAGGCCTAC
CAGCGTGTGC TGGCGCATCT GATGAAAGGC TTTGCCGGCC AGCGCGTCGA CTTCGAGATG
GAGCTCGAGT ATCCGTACGT GGGGCCGGGG CGCCGTTTCA TCCACGCCGC CTATACGCCG
CAGCGCGGGC CGGACGGCAA GGTGGTCGCC CTGGTCTGCA TCATCGAAGA CATCACCGAA
CGCAAGGAAG CCGAACGCGA GCGCTTCCGG CACCAGCGCG AATTCGTCAC GCTGGTGGAG
AATGCGCCGG ACATCATTGC GCGTCTCGAC CCCGCGCTGC GCTGCGTGTA CATCAACCGT
GCGGTGACGG AGGCGTTCGG TGTGCCGTCG GGTGAGCTGA TCGGGCAGGC GCTGTCGGAC
TCGGGGCTGC CGGCCTGCAT TACGGGGCCG CTGGAGGCGG CGGCCCAGTG CGCGTTCGAC
ACGGGCGGCG AACAGGCGCT GACGCTGCAT CTGGAGGCGG ATGCAGCGCG CCCGCATGTC
GCGCACTACA ACGCGCGCGT GATTCCCGAG GCCGATCGCC ATGGCGAGAT GGAGTCGGCG
CTGCTGATCA TCTACGACGT GAGCGAGCGC ACCGAGGCAG AGCGCGAGCG CAATGCGCTG
CTGCTGCGCG AGCAGGCCGC CCGCGCGCAG GCCGAGGCCG CGGCGCATGC GCGTGATCAG
TTCCTGGCGG TGGTGTCGCA CGAGCTGCGC TCGCCGCTGA ACGGCATCCA GAGCTGGGCG
TATGTGCTGG AGAACCAGCT GGCCGAGGGG TCGCAGCCGG TCCAGCGCGC GCTCGCGGGC
ATCCGCACCG GCGTGGCGCA GCAGGTGCGG CTGATCGAAG ACCTGCTCGA TGCCACCCGC
GTGATGAGCG GCAAGCTGCG GCTCACGCGC CAGCCGTTCC CGTTGCGCAC GGCGCTGGAG
CGCGCGCTCG ACAGCGTCCG CGCGCAGGCG GCCGAGCGGC GGATCACACT GCACGAGGCG
TGGTCGCTCG GCACGGAGGA GATCGACGGC GACGCCGACC GCATCCAGCA GATCGTGTGG
AACCTGCTGT CCAACGCCAT CAAGTTCACG CAGGAAGGCG GCGACGTCTG GCTGGCCGCG
GACGTGTCGG GCGAAGTGGC GCGCATCGTC GTGCGGGACA ACGGACGCGG CATCGCGCCG
GCGTTCGTGC CGCACCTGTT CGATCCGTTC CGGCAGGCCG ACGGCTCGCA CACGCGGCGC
ACCGGCGGCC TCGGGCTCGG GCTGGCCCTG GTCAAGCGCC TGACCGAGCT GCATGGGGGG
CTGGTCCACG CGCAGAGCGA TGGCGAGCAG CACGGCGCGA TATTCACCGT GTATCTGCCG
CTGCATGAAG GTGCCGAGCT GACGGCGGCG CTCGCCGAGG ACGTGGTGCG GCCGGGGCCG
CTGCCGTCGC TGGGCGGCCT GCGCGTGCTG CTGATCGACG ACCAGCAGGA TGCCCGCGAG
GCGCTGGCGA CGCTGCTGGG GCAGGTCCAC GCCGAGGTCG GCAGCGCGGG CTCGGGCGAC
GAGGCGATCG CCCAGCTGGA GGCCTGGGGC GGCCTGCGCA GGCCGCATGC GGTGGTCTGC
GACATTGCGT TGCCGGATGA GGATGGCTAC GCCATCCTGC AGCGGATCCG CGGATGGGAG
CGCCGGCATC TGCCGGCCGG CGTGGCGCAG GTGCCCGCCA TTGCGCTGAC CGCTTTTGCC
CAGCCCCACG ATCGCGCCCG TGCGCTGGCA AGCGGGTTCC AGGAGCATCT TTCGAAGCCG
GTGTCGCCGC GCGACCTGGT GCGGGCGCTG CGGACCCTGG CGCGCCGCTA G
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| Protein sequence | MKEPVVSHFV PERGITSAPG RSYGTEPLDV FWVDDLLDGT RLHVSAAARQ RWGMSPETLC
GPREHWLAHV HSGDHAALRA AWQGLAQGRD FALEYRWIGT DGAEHRVREC GYRLPAQGGA
ATHAVGVVED MTQRLRTLAE LTESEFQLQW LAESIPFPIV QLGPDHCIRF ANHAYAQRFG
LPAADVLGRH VRELMGHEAY QRVLAHLMKG FAGQRVDFEM ELEYPYVGPG RRFIHAAYTP
QRGPDGKVVA LVCIIEDITE RKEAERERFR HQREFVTLVE NAPDIIARLD PALRCVYINR
AVTEAFGVPS GELIGQALSD SGLPACITGP LEAAAQCAFD TGGEQALTLH LEADAARPHV
AHYNARVIPE ADRHGEMESA LLIIYDVSER TEAERERNAL LLREQAARAQ AEAAAHARDQ
FLAVVSHELR SPLNGIQSWA YVLENQLAEG SQPVQRALAG IRTGVAQQVR LIEDLLDATR
VMSGKLRLTR QPFPLRTALE RALDSVRAQA AERRITLHEA WSLGTEEIDG DADRIQQIVW
NLLSNAIKFT QEGGDVWLAA DVSGEVARIV VRDNGRGIAP AFVPHLFDPF RQADGSHTRR
TGGLGLGLAL VKRLTELHGG LVHAQSDGEQ HGAIFTVYLP LHEGAELTAA LAEDVVRPGP
LPSLGGLRVL LIDDQQDARE ALATLLGQVH AEVGSAGSGD EAIAQLEAWG GLRRPHAVVC
DIALPDEDGY AILQRIRGWE RRHLPAGVAQ VPAIALTAFA QPHDRARALA SGFQEHLSKP
VSPRDLVRAL RTLARR
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