Gene RS02058 details

Gene Information

• Locus tag: RS02058
• Symbol: RSp1400
• ID: 1223712
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 1762532
• End bp: 1764412
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637241263
• Product: hypothetical protein
• Protein accession: NP_522959
• Protein GI: 17549619
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG1082] Sugar phosphate isomerases/epimerases; [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
• TIGRFAM ID: [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0224521
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.842888
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCTTCCC CTGCCTTTCC CTTCCGCAAA TCGATCGCCA CCGTGTCGCT GTCGGGCACG 
CTGCCCGAGA AACTGGAAGC CGCCGCGGCC GCCGGCTTCG ACGGCGTCGA ACTGTTCGAG 
CATGATCTGC TGACCTTCGA CGGCACCCCC GCAGACGTCC GCCGCATCGT GCGCGACCTG 
GGGCTGGAGA TCACCCTCTT CCAGCCCTTC CGGGATTTCG AAGGCATGCC CGACGCGCTG 
CGCGAGCGCG CCCTGGCCCG CGCCGAGCGC AAGTTCGACC TGATGCAGGA ACTGGGCACC 
GGCCTCGTTC TGGTGTGCAG CAACACGCAG GAACACGCGC TGCCCGACCC CGCGCGCGCC 
GCCGCCGACC TCGCCGAAAT GGCCGAGCGC GCGGCGCGGC GCGGGCTGCG GGTCGGCTTC 
GAGGCGCTGG CGTGGGGCCG CCACGTCAAC CGCTGGCGGC AGGCGTGGGA GATCGTCCGC 
CGGGCGGACC ACCCGGCGCT GGGGCTGATC CTCGACAGCT TCCACACGCT ATCGGTGGGC 
GACACACTCG ACGGGCTGGA AGACGTGAGC GCCGACAAGC TCGCCTTCGT GCAGCTGGCC 
GACGCGCCGC GCCTGTCGAT GGATGCGCTG TCGTGGAGCC GCCACTACCG CAACTTCCCC 
GGCCAGGGTG AACTGCCGGT CGTCGCCTTC ACGCGCAAGG TCATCGACTG CGGCTATCGC 
GGGCCGCTGT CGCTGGAGGT CTTCAACGAC GAATTCCGCG CCGCGCCGGC CCGCCAGACC 
GCGATGGACG GCCTGCGCTC GCTGATCTGG CTGGAGGCCG AATGCGGCGC CGACACCCTG 
CCGGCGCCGC CGCGCTTCGG CGGCGTGGAG TTCCTCGAGT TTGCGGTGGA CTACCGCACC 
GGGCTGGCGC TGGCCGCGCA GGTCAAGGCG CTCGGCTTCC GCCACGCCGG CCGGCACCGC 
TCCAAGGCGG TGGACCTGTA CCGGCAGGGC AGCGTCAACC TGATCCTCAA CAGCGAGCAG 
GACAGCGCCG CCGCCGAGCA TTTCGCGCTG CACGGCCCGT CGGTGTGCGC GATCGGACTG 
CGCGTGGACG ATGCCCGGCG CGCCCTGGCC CGCGCCCGCG CGCTGCTGTG CCGCGAGTGG 
CAGGAGCGCA TCGGCGCCAA CGAGCGGCGC ATCCCCGCGC TGCGCACGCC CGACGGCATG 
CTGATGTACC TGGTGGACGG CGACGGCCCG CGCACCATCT ACGACGACGA TTTCCTCCTC 
AAGCCACCGC CCGCGGCCGG CGAGTCCGGC AACGAGCCGC CCTACCGCCT CGACCACATC 
GCCCAGGCGC TGCCCGCGCA CCGCATGGAC ACCTTCGTGC TGTTCTACCG CGCCGTGCTG 
GGCCTGCAAC CGCTGGCCCT GCAGGAGATT CCCGATCCCT ACGGCCTGGT GCGCAGCCGC 
GCCATGGTCA GCGCCGACGG CGCGCTGCGC CTGCCGCTCT CGGTGAGCGA AAGCGGGCGG 
ACGTCGACGG GGCGGCTGGT GTCGGCCTAT GCCGGCGCGG GCATCCAGCA CATCGCGCTG 
GGCACGCCGC GCATCCTGGA AACGCTGGCC GATGTGGTGC AGGGCGGCGC GCGGCTGCTG 
CACATTCCCG AGAACTACTA CGACGACCTC GAAGCACGCC ACCCGCTGTC CGCCGAACAG 
GTCGAGGCGC TGCGCGACGC GGCGGTGCTG TACGACCGCG ACACCCACGG CGAATTCCTG 
CACGCCTACA CCGTGCCCTT CCACGACCGC TTCTTCTTCG AGCTGGTGCA GCGCGACGGC 
TACGCCGGCT TCGGCGCGGC CAACGCGGCG GTGCGCATGG CCGCCCAGGC AGCGATGACG 
CAGTACCGGC AGGAGGCGTG A 

 

Protein sequence

MPSPAFPFRK SIATVSLSGT LPEKLEAAAA AGFDGVELFE HDLLTFDGTP ADVRRIVRDL 
GLEITLFQPF RDFEGMPDAL RERALARAER KFDLMQELGT GLVLVCSNTQ EHALPDPARA 
AADLAEMAER AARRGLRVGF EALAWGRHVN RWRQAWEIVR RADHPALGLI LDSFHTLSVG 
DTLDGLEDVS ADKLAFVQLA DAPRLSMDAL SWSRHYRNFP GQGELPVVAF TRKVIDCGYR 
GPLSLEVFND EFRAAPARQT AMDGLRSLIW LEAECGADTL PAPPRFGGVE FLEFAVDYRT 
GLALAAQVKA LGFRHAGRHR SKAVDLYRQG SVNLILNSEQ DSAAAEHFAL HGPSVCAIGL 
RVDDARRALA RARALLCREW QERIGANERR IPALRTPDGM LMYLVDGDGP RTIYDDDFLL 
KPPPAAGESG NEPPYRLDHI AQALPAHRMD TFVLFYRAVL GLQPLALQEI PDPYGLVRSR 
AMVSADGALR LPLSVSESGR TSTGRLVSAY AGAGIQHIAL GTPRILETLA DVVQGGARLL 
HIPENYYDDL EARHPLSAEQ VEALRDAAVL YDRDTHGEFL HAYTVPFHDR FFFELVQRDG 
YAGFGAANAA VRMAAQAAMT QYRQEA