Gene RS02019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS02019 
SymbolRSp0044 
ID1222592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp47522 
End bp48685 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content62% 
IMG OID637239903 
Producttranscription regulator protein 
Protein accessionNP_521605 
Protein GI17548265 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTG ACGTACAGGC TTCGCCCCTC TCCCAACCGG CACCCAAGCG CATCCGGTTT 
GGCATCGTGC TGTTGCCGAA CTTCACGCTG ACCGCGTTCT CGGGGTTCGT CGACATGCTG
CGTTTGTCTG CCGATGACGG TGACTACAGC AAGCCGGTGC GCTGCGCATG GAGTGTGATT
GGTGAAACAC TTTCACCGGT GCGGGCGAGC TGCGGGATCC AGGTCACGCC GTGGGAAACC
TTTGAAGAGG CCGAGCCGTT CGACTACGTC GTCGTCGTGG GAGGCCTGCT GCACTCAGGC
CCCCAGGCCA GTCCGAAAAC ACTGGAGTTC ATCCGGCATG TAGCCGGCGC CGGCGCAACG
CTCGTCGGTA TCTGCACCGG CGTGTTTTCG CTGATGCGCG CAGGCGTGCT CGACGGACAT
CGCACGTGCG TAAGCTGGTT CCACTACTGG GATTTCATCG ACCGGTTTCC GTCCGCCGAC
CCGGACCTTC TGATTGCTGA CCGGCTATTC GTGATCGACA GGCGGCGCAT CACCTGTTCC
GGCGGACGGG CATCGATCGA CGTCGCCGCG GCAATCCTCC TGCGCCACTT CGATCATGCG
ACCGTGCAGA AAGCCCTGCG AATACTGCTC GTGGGCGAAA TGCAAAAGGG GAATGCGCCA
CAGCCGCAAC CAGCGGGCCT CGAACCCGCG ACACACCCGA AGGTCAAGCG CGCCATCCTT
CTGATGGAAC AGCACATTGG TCGCCCACTG CCGTTAGAGG AACTCGCTCA CAAGCTTGAC
CTGTCAGCAC GGCAGCTTGA ACGACTCTTC AAGGCCGAAA CGGGCAAGAG CCCGCAGACG
TTTGCAAAGC AGGTGCGGCT ACGCACAGCC GCTTGGCTGC TGACCAGTTC AGACCGCGGG
GTTGCGGACA TCGCGTTCAG TTGCGGGTTC GCGGATGCCT CGCATCTGGG CCGCGAGTTC
CGTAAGCAGT TCGGTATGCC GCCAGCTGCA TACCGAGACA AGGCCACAAA TTCAGATGAC
CCCGCGAGTC ACGATAACGA CGTCGCAGTA AGGTCAGGGG CGGAGAGCGA TTTGATTTCC
GTTGATCAAC ATGTCGTGCC AAGCCCGTCT TCCAGTGCCA GCTCGCTATT GCTGGCCGCC
AATGGCGTGC CGGAGATGCG GTAG
 
Protein sequence
MNSDVQASPL SQPAPKRIRF GIVLLPNFTL TAFSGFVDML RLSADDGDYS KPVRCAWSVI 
GETLSPVRAS CGIQVTPWET FEEAEPFDYV VVVGGLLHSG PQASPKTLEF IRHVAGAGAT
LVGICTGVFS LMRAGVLDGH RTCVSWFHYW DFIDRFPSAD PDLLIADRLF VIDRRRITCS
GGRASIDVAA AILLRHFDHA TVQKALRILL VGEMQKGNAP QPQPAGLEPA THPKVKRAIL
LMEQHIGRPL PLEELAHKLD LSARQLERLF KAETGKSPQT FAKQVRLRTA AWLLTSSDRG
VADIAFSCGF ADASHLGREF RKQFGMPPAA YRDKATNSDD PASHDNDVAV RSGAESDLIS
VDQHVVPSPS SSASSLLLAA NGVPEMR