Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02019 |
Symbol | RSp0044 |
ID | 1222592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 47522 |
End bp | 48685 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637239903 |
Product | transcription regulator protein |
Protein accession | NP_521605 |
Protein GI | 17548265 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCTG ACGTACAGGC TTCGCCCCTC TCCCAACCGG CACCCAAGCG CATCCGGTTT GGCATCGTGC TGTTGCCGAA CTTCACGCTG ACCGCGTTCT CGGGGTTCGT CGACATGCTG CGTTTGTCTG CCGATGACGG TGACTACAGC AAGCCGGTGC GCTGCGCATG GAGTGTGATT GGTGAAACAC TTTCACCGGT GCGGGCGAGC TGCGGGATCC AGGTCACGCC GTGGGAAACC TTTGAAGAGG CCGAGCCGTT CGACTACGTC GTCGTCGTGG GAGGCCTGCT GCACTCAGGC CCCCAGGCCA GTCCGAAAAC ACTGGAGTTC ATCCGGCATG TAGCCGGCGC CGGCGCAACG CTCGTCGGTA TCTGCACCGG CGTGTTTTCG CTGATGCGCG CAGGCGTGCT CGACGGACAT CGCACGTGCG TAAGCTGGTT CCACTACTGG GATTTCATCG ACCGGTTTCC GTCCGCCGAC CCGGACCTTC TGATTGCTGA CCGGCTATTC GTGATCGACA GGCGGCGCAT CACCTGTTCC GGCGGACGGG CATCGATCGA CGTCGCCGCG GCAATCCTCC TGCGCCACTT CGATCATGCG ACCGTGCAGA AAGCCCTGCG AATACTGCTC GTGGGCGAAA TGCAAAAGGG GAATGCGCCA CAGCCGCAAC CAGCGGGCCT CGAACCCGCG ACACACCCGA AGGTCAAGCG CGCCATCCTT CTGATGGAAC AGCACATTGG TCGCCCACTG CCGTTAGAGG AACTCGCTCA CAAGCTTGAC CTGTCAGCAC GGCAGCTTGA ACGACTCTTC AAGGCCGAAA CGGGCAAGAG CCCGCAGACG TTTGCAAAGC AGGTGCGGCT ACGCACAGCC GCTTGGCTGC TGACCAGTTC AGACCGCGGG GTTGCGGACA TCGCGTTCAG TTGCGGGTTC GCGGATGCCT CGCATCTGGG CCGCGAGTTC CGTAAGCAGT TCGGTATGCC GCCAGCTGCA TACCGAGACA AGGCCACAAA TTCAGATGAC CCCGCGAGTC ACGATAACGA CGTCGCAGTA AGGTCAGGGG CGGAGAGCGA TTTGATTTCC GTTGATCAAC ATGTCGTGCC AAGCCCGTCT TCCAGTGCCA GCTCGCTATT GCTGGCCGCC AATGGCGTGC CGGAGATGCG GTAG
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Protein sequence | MNSDVQASPL SQPAPKRIRF GIVLLPNFTL TAFSGFVDML RLSADDGDYS KPVRCAWSVI GETLSPVRAS CGIQVTPWET FEEAEPFDYV VVVGGLLHSG PQASPKTLEF IRHVAGAGAT LVGICTGVFS LMRAGVLDGH RTCVSWFHYW DFIDRFPSAD PDLLIADRLF VIDRRRITCS GGRASIDVAA AILLRHFDHA TVQKALRILL VGEMQKGNAP QPQPAGLEPA THPKVKRAIL LMEQHIGRPL PLEELAHKLD LSARQLERLF KAETGKSPQT FAKQVRLRTA AWLLTSSDRG VADIAFSCGF ADASHLGREF RKQFGMPPAA YRDKATNSDD PASHDNDVAV RSGAESDLIS VDQHVVPSPS SSASSLLLAA NGVPEMR
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