Gene RS01963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS01963 
SymbolRSp0745 
ID1223052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp935144 
End bp935647 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID637240605 
Producthypothetical protein 
Protein accessionNP_522306 
Protein GI17548966 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.229622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATA TCTACGTCAA GTTCGACAGC CCGGCCATCA AGGGGGAGTC CCAGGACAAG 
GATCACAAGG AGTGGATCGA AGTCAACAGC TGGTCCCAGT CGATCATCCA GCCGCGTTCG
GCCACGGCCT CGACCGCGGG CGGCCATACC GCCGAGCGTT GCGAGCACCG CGACATGGTG
TTCTCCAAGG ACCTGGACGT GGTCAGCCCG CTGCTGTACC AGCACGCTTC GGGCGGCACG
ACCTTCGGTG AAGTGACGAT CGAGTTCTTC CGCGCCGACG GTGAAGGCAA CCGCGTGAAG
TACCTCGAGG TCAAGCTGAA GAACGCGATT TTGAGCGAAG TGGATTCGCA GGTGGCTGCC
GAGGGCATCC CGACCGATAC GTTCAGCCTG CGCTACGCGG CCGTGCAGTG GAAGTACACC
CAGCAGAAGA GCGCCGGCGG CCAGGGCGGC AACTCGCAGG GCGCCTGGAG CCTGACCAAG
AACGACAAGA CCTACTCGGT TTAA
 
Protein sequence
MKDIYVKFDS PAIKGESQDK DHKEWIEVNS WSQSIIQPRS ATASTAGGHT AERCEHRDMV 
FSKDLDVVSP LLYQHASGGT TFGEVTIEFF RADGEGNRVK YLEVKLKNAI LSEVDSQVAA
EGIPTDTFSL RYAAVQWKYT QQKSAGGQGG NSQGAWSLTK NDKTYSV