| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01929 |
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| Symbol | RSp0778 |
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| ID | 1223085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 978998 |
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| End bp | 979744 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637240638 |
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| Product | transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein |
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| Protein accession | NP_522339 |
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| Protein GI | 17548999 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.746701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGCCCCA CCATAGAAAT CGAGATCGTC ATGAAAAATT GGCAAGAAGA TCTGCTGGAT
ATTTTCTCCG ACGCGCAGGC GAGCACGTCG GACGTGTTTG AGCACATCGA GGCGGCGGCG
CTGGCGCTGG GGTTCGAGCA TGTCGCCTAT GGCTTCAAGG CACCGCTGCC CCTGAGCGAG
CCCAAGGTGG TCTTGCTGAA CAACTACCCG CAGGCCTGGC GCGCGCGCTA TCTGGAGGCC
GGCTACCTCC ACGTCGACCC GAGCGTTGCG CAGGCGTGCC GATCGCAGGC GCCGATCGTC
TGGTCCGACC GGTTGTTTCA GGACGTGCCC GCGCTATGGG ATGAGGCGAA GGCGCACGGG
CTGCGGGTCG GCTGGGCGCA ATCGAGCCTG GACAGCCTGG GGGTGGGCGG CATGCTCAGC
CTGTCCCGCT CGTGCGAGCC GCTATCGGCG CGGGAGCTCG CCGAGAACAC GCGCCGGATG
CAGTGGCTCG CGCATATGGC GCACGTGGCC CTGTCGCGGC TGCTGCGGGC GGACGTGGCC
GGATATTCCG ACGATAACCT GACCAACCGC GAGGTGGAGG TCATGAAGTG GACGGCCGAC
GGCAAGTCGG CGCAGGACAT TGCGGACATC CTGGCCATCT CCAAGAACAC AGTGGATTTT
CACGTGAAGA ACGCCGTCAA GAAGCTGCAC GCGGTCAACA AGACCGCGGC GGTCGTGCGC
GCCGCCATGC TGGGGTATCT GTTCTGA
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| Protein sequence | MSPTIEIEIV MKNWQEDLLD IFSDAQASTS DVFEHIEAAA LALGFEHVAY GFKAPLPLSE
PKVVLLNNYP QAWRARYLEA GYLHVDPSVA QACRSQAPIV WSDRLFQDVP ALWDEAKAHG
LRVGWAQSSL DSLGVGGMLS LSRSCEPLSA RELAENTRRM QWLAHMAHVA LSRLLRADVA
GYSDDNLTNR EVEVMKWTAD GKSAQDIADI LAISKNTVDF HVKNAVKKLH AVNKTAAVVR
AAMLGYLF
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