| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01928 |
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| Symbol | RSp0779 |
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| ID | 1223086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 979962 |
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| End bp | 980510 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637240639 |
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| Product | autoinducer synthase |
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| Protein accession | NP_522340 |
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| Protein GI | 17549000 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.697337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTTTTTG GCGATCGGGA GACACTGAAG CCGGTCGCTG TTTCCAATCT TGGTCGCTAT
CGCTACAAGG TATTCGTCGA GCGCCTGAAG TGGCACTTGC CCTGCGAAGC GGGGCATGAA
TTCGACCAGT TCGATCGCAG CGACACGAAG CATTTGATCG CGCTGGGTCA GGGCGAGGAC
ATCGTCGGTT GCGCACGGCT GCTGCCGACC ACGCGCCCCT ATTTGCTGGA AAGCGTCTTT
CCGGCCCTGC TGAATGGCCA GCCGCCGCCG AGCAGTCCCG AGGTGTGGGA GCTGTCGCGA
TTCGCGGCGG TCGATTTCAG TGAAGACACG CCCTCGCTGC TGAAGCAGTT TTCCGTGCGT
GCCGCGGTGG AGTTGCTGCG CATCAGCATG GCGTGCGCGA AACACTGCGG CGCCAAGAAA
TTGGTCACGG TGTCTCCGAT GGGGGTGGAG CGCTTGCTTG CCTGGGCCGG ATTTTCCTGG
GTGCGTGCCG GTCATCCCCT CAGGTTCGGA GATGACCTGG TCGTGGCCGG ATATATCGAT
GTCGCCTGA
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| Protein sequence | MLFGDRETLK PVAVSNLGRY RYKVFVERLK WHLPCEAGHE FDQFDRSDTK HLIALGQGED
IVGCARLLPT TRPYLLESVF PALLNGQPPP SSPEVWELSR FAAVDFSEDT PSLLKQFSVR
AAVELLRISM ACAKHCGAKK LVTVSPMGVE RLLAWAGFSW VRAGHPLRFG DDLVVAGYID
VA
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