| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01888 |
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| Symbol | RSp0819 |
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| ID | 1223126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1034495 |
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| End bp | 1035724 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637240679 |
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| Product | drug efflux lipoprotein |
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| Protein accession | NP_522380 |
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| Protein GI | 17549040 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.524066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCA CGCCGCCCGC CCTCGCCCCT CTTCTTGCCG CGCTTGCCGC CGCCAGCCTG
CTGGCCGCCT GCGGCAAGCC GCCGGGTGGC CCGCCGCCAG CGGAGGGCAC GCCGGTGGTC
GGCGTGATGA CCGTGCAGCC GCAGCGCGTG ACGCTCGATA CCGAGCTGCC CGGGCGCACG
GTCCCCTTCC TGGTCGCCGA TGTCCGGCCC CAGGTCAACG GCATCATCAA GGCCCGCAAA
TTCCGCGAAG GCAGCGACGT GAAAGCGGGC GCGGCGCTCT ACCAGATCGA TCCGGCCACC
TACCAGGCGG CCTACGACAG CAACGTGGCG GCCCTGGCCA AGGCCCAGGC CAACCTCAAG
ACCACGCGCC TGAAGGCCGA GCGCCACAAG GAGCTGGTGG CGATCCAGGC CGTCAGCCGG
CAGGACTACG ACGACGCCGC CGCCGCGCTG GCCCAGGGCG AGGCCGACGT GGCCGCCGCC
CGCGCCAACG TGGAGACCAG CCGGATCAAC CTGGCCTACG CCCGGGTGGA TGCCCCCATC
TCCGGCCGGA TCGGCAGATC CAGCGTGACG CCGGGCGCGC TCGTCACCGC CAACCAGACC
ACCTCGCTGG CCACGATCCA GCAGCTCGAC CCCATCTACG TGGACGTGAC CCAGCCCAGC
GCCGCACTGC TGCGCCTGCG GCAGGCGATG GCCCGCGGCG ATCTCCAGAA GAGCGGCGCC
AACGCGGCCA CCGTGCGGCT GCTGCTGGAA GACGGCAGCG CGTATCCGCT CGAAGGCAAG
CTGGAGTTCT CCGACGTGAC GGTGGACCAG AACACCGGCT CCGTGACGCT GCGCGCGGTG
TTCCCCAACC CGAGCGCCAT CCTGCTGCCC GGCATGTATG TGCGCGCCGT GCTGCCGGAA
GGCGTGAAGG ACGAGGCCCT GCTGGTGCCG CAGCAGGCCG TGGCGCGCGA CAGCACCGGC
AAGCCGTTCG CCTACGTGGT GGGCAACGAC CGCAAGCTGC AGCGCCGCAC GCTGGAAACG
GAGCGCACCG TGGGTGACCA GTGGCTGGTG CGCAGCGGCC TGCGCATCGG CGACCAACTG
GTGGTGGAAG GCCTGCCGCG TGCCGTGCCC GGCGCCGAGG TCAAGACCAC GCCGTGGACG
GGCAAGACGG CAACGTCGAA CCCGGCCGCC CCCGCGGCGC CCGCTGTGCG GACGGCCGTC
GGGCAGCGCA CCACCGTCGC CGCCAACTGA
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| Protein sequence | MRPTPPALAP LLAALAAASL LAACGKPPGG PPPAEGTPVV GVMTVQPQRV TLDTELPGRT
VPFLVADVRP QVNGIIKARK FREGSDVKAG AALYQIDPAT YQAAYDSNVA ALAKAQANLK
TTRLKAERHK ELVAIQAVSR QDYDDAAAAL AQGEADVAAA RANVETSRIN LAYARVDAPI
SGRIGRSSVT PGALVTANQT TSLATIQQLD PIYVDVTQPS AALLRLRQAM ARGDLQKSGA
NAATVRLLLE DGSAYPLEGK LEFSDVTVDQ NTGSVTLRAV FPNPSAILLP GMYVRAVLPE
GVKDEALLVP QQAVARDSTG KPFAYVVGND RKLQRRTLET ERTVGDQWLV RSGLRIGDQL
VVEGLPRAVP GAEVKTTPWT GKTATSNPAA PAAPAVRTAV GQRTTVAAN
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