Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01774 |
Symbol | RSp0675 |
ID | 1222982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 860114 |
End bp | 860785 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637240535 |
Product | lipoprotein |
Protein accession | NP_522236 |
Protein GI | 17548896 |
COG category | [S] Function unknown |
COG ID | [COG4380] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0155892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.405057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC GCTTCCTGAA ACTGTTTGCC GCCATCGGCG TGGTTGCCCT GATGGCAGGC TGCGCGGCGC CGGCCAAGCA CGTCGACTAC GCAGCCTTCA AGGCCAGCAA GCCGCGCTCG ATCGTGGTGC TGCCGCCGCT CAATCAGTCG CCGGACGTGA AGGCGACCTA CGGCATGCTG TCGCAGGTGA CCAAGCCGCT GGCCGAAGCG GGCTACTACG TGCTGCCGGT CGCGCTGGTC GACGAGACCT TCCGCCAGAA CGGCCTGACC ACCGCCGGCG ACATCCACGG CGTGCCGGTG GCCAAGCTCA AGGACATCTT CGGCGCCGAT GCCGCGCTGT ACGTCACCAT CACGCAGTAC GGCACCAAGT ACATGCTGAT CGACAGCGTC ACCGTGGTGG CGGCCGACGC CAAGCTGGTG GACCTCAAGA GCGGCGAGAC GCTGTGGACG GGCCATGCCA GCGCGTCGAG CAAGGAAACC GGCAACAGCG TCGACGTCAA CGCCGGCGGC ATCATCGGCG TGCTGGTGTC GGCGGCGGTC AAGCAGATCG TCAACACCGC GATCGACTCG GGCTACTCGG TGGCAGGCGC GACCAGCGCG CGGCTGCTGT CGGCGGGCCC GCATGGTGGC CTGCTGTACG GTCCGCGTTC GCCGAAGTAC GGCACGGACT GA
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Protein sequence | MAKRFLKLFA AIGVVALMAG CAAPAKHVDY AAFKASKPRS IVVLPPLNQS PDVKATYGML SQVTKPLAEA GYYVLPVALV DETFRQNGLT TAGDIHGVPV AKLKDIFGAD AALYVTITQY GTKYMLIDSV TVVAADAKLV DLKSGETLWT GHASASSKET GNSVDVNAGG IIGVLVSAAV KQIVNTAIDS GYSVAGATSA RLLSAGPHGG LLYGPRSPKY GTD
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