| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01766 |
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| Symbol | RSp0683 |
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| ID | 1222990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 870498 |
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| End bp | 871178 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637240543 |
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| Product | hypothetical protein |
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| Protein accession | NP_522244 |
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| Protein GI | 17548904 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.720058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.155386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCTGCA ATCTGGAAGA CAACATCGGA CGGATCAGGA AAGCCATCCA GCATGCGGCC
ATCGACAACG GCCGTCGCGC CGATGCGGTG ACGCTCGTTG CCGCATCAAA GACGGTCGAA
TCCCATCGCA TTCAGAAGGC AATCGATTTG GGGCTGACCG TGTTTGGCGA GAACCGGGTC
CAGGAAGCCG TGAGCAAGTG GCCGGAACTG CGCAGCCGCA ACCCCGGCAT CGAGCTGCAT
CTGATTGGCC CGCTGCAGTC GAACAAAGTC CGCCAGGCCG TTGACCTCTT TGACGTGATT
GAATCGGTGG ACCGGTCCAG GCTGGCCAGG GCCATCGCGG AGGAAGCCGA AAGGCAAGGA
CATGCTCCGG CCATCTACAT TCAGGTGAAC GTCGGCAAGG AGCCGCAGAA AGGTGGCGTT
CTACCCGCCG AGGCCTCGGC CTTGATCGGC GAATGCCGTG ATGTCTATCA ACTGAACGTC
CAAGGGTTGA TGTGCATTCC GCCCGCCGGC CTCGATCCCT CCGGTCATTT TGCCGGCCTG
CGATCGATCG CAGCGGATCA CGGGCTCCAC GTCCTGTCGA TGGGGATGAG CGCGGACTAC
CCCCAGGCGA TCGCGCAAGG CGCCACGCAT GTGCGGGTCG GCAGCGCCCT GTTCGGCGCA
CGCGCGCCGC TTCAGCCATG A
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| Protein sequence | MGCNLEDNIG RIRKAIQHAA IDNGRRADAV TLVAASKTVE SHRIQKAIDL GLTVFGENRV
QEAVSKWPEL RSRNPGIELH LIGPLQSNKV RQAVDLFDVI ESVDRSRLAR AIAEEAERQG
HAPAIYIQVN VGKEPQKGGV LPAEASALIG ECRDVYQLNV QGLMCIPPAG LDPSGHFAGL
RSIAADHGLH VLSMGMSADY PQAIAQGATH VRVGSALFGA RAPLQP
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