Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01681 |
Symbol | RSp0909 |
ID | 1223216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1147051 |
End bp | 1147719 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637240769 |
Product | hypothetical protein |
Protein accession | NP_522470 |
Protein GI | 17549130 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.793044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCA CCGTTACGAT CACTTCGGAT TTCATCTGCC CCTGGTGCCT GATTGGAGAG CGCCGGCTGG CGAAAGCGAT CGGCGCCCTG CCCGGTGACG TCGCGGTCGA GCTGAAGTGG CGCCCTTTTG AACTCAACCC GGCGATGCGT CCGGAGGGCA TGGATCGCCA GACCTACCGG TCGCTCAAGT TCGGCAGCTG GGAGCGTAGC CGGATGCTTG ACGCACACAC CGTGGAGGCG GCCAGGGACG ATGGCATTGC GTTCGATTAC GCCGCGATCG CCAAGACGCC CAACACCTTC CTCGCCCACC GCCTCAACTG GTTCGCCGCA CGCCGGGGCC TCGCCACCCC GATCGCGAAC GCCGTGTTCT CCGCTTATTT CGAGCACGGC CGCGATATTG GCGATGCGGC GGTGCTGGCC GACATCGCCG CCGAAAACGG ACTGGGGCGC GACGAGGTCA GCGCGTTCCT GGCGGGCGAC GAGGGCACCC GGGACGTTCG CGAAGCCGAA CGGGCCGTCC AGGCAGGCGG CGTGCGCAGC GTTCCCCTGT TCGACATCGA CGGCGAGACC GTGAGCGGCG CGCAATCCGT GGCGGCGTTC GAAGCGGCAC TGCGTCGCGC CATTGCGCGC ACGCACGCCT GCGGCACCGG GGCCTGCCCG GTGTCCTGA
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Protein sequence | MTLTVTITSD FICPWCLIGE RRLAKAIGAL PGDVAVELKW RPFELNPAMR PEGMDRQTYR SLKFGSWERS RMLDAHTVEA ARDDGIAFDY AAIAKTPNTF LAHRLNWFAA RRGLATPIAN AVFSAYFEHG RDIGDAAVLA DIAAENGLGR DEVSAFLAGD EGTRDVREAE RAVQAGGVRS VPLFDIDGET VSGAQSVAAF EAALRRAIAR THACGTGACP VS
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