| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00828 |
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| Symbol | RSp0400 |
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| ID | 1222707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 505917 |
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| End bp | 507455 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240260 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_521961 |
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| Protein GI | 17548621 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.33694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTT TCTCGATCAA CACGCCCGCC CGTCTCATCG GCACGGCCCT GCTCTTCTCG
CTGACCGTCA GTGCCGGGGC CGCCTTGTCG CTCTATGAGA TGCGGCTCGA CGCCTTGAAA
TGCGCCAAGG ACGCCGGCGC CAACATCGCC CTCATCATCG AGCGGGATGT CGCGCGCAAT
CTGGAGCTCT ATTCGCTGTC CGTGGAAACG GTGCTCGAAC GGCTGGCGGA TCCCGAAGTC
CACCAGGTGT CCAACCATAT CCGCCGCCTC GTCCTGTTCG ACGGCGTCGC GCAGGCGCGG
GATCTCGGCT CCATCCTCGT CACGGACGCC CGAGGCCAGG TGGTCCTGGA CTCGAAGGCC
GAGCCCGCAC GCAACATCCA CATCGGCGAC CGCGACTATT TCCAGCAGCA GGCCCGCATC
GACAGCACGG CCGTTCTCAT CAGCAAGCCG CTCGAGGCGC GCACGGGCTA TGGCGCCTCC
ATCACGGTCA GCCGGCGCCT GAACGATGCA CAGGGCAAGT TCGCCGGGGT GGTTTCGGGG
GCGCTGCGCA TCAGCTATTT CAATCGCCTG TTCTCGGGCA TGACGCTCGG CCCCAAGGGC
GCGATCGCGC TGTTCTACGC CGACGGCACC CTGATCGCGC GCCGCCCTGC CCCGCCGGCC
GCCGGCGCGG CAGAAAAACG CAGTCCCGAA GCGCTGAAGC GGGTCATCGA CACGACGGAT
GGCCTCTACC TGGGCAAATC GGTGCGCGAC GGCATCGAGC GGCTCTATAC CTACCGGCGC
ATCGGACACT ACCCGCTCTA CGTTGCCGTC GGCGCCGCGA CCGAAGACAT CTATGCCAAC
TGGACATCGC GGGCCTGGGC GATCGGCCTG CTCGTCGCGG TGTTCAATCT CGTCACGATG
GCGCTGGCCT ACCAGTTCGC CAAGCAGCTG GAAAAGCGGC TCGCGGCAGG CCGCCGGCAT
GCGGAACTGG CGATCACCGA TGCGCTGACC GGCCTGCCCA ACCGGCGCGC CCTGGATGCC
TTCCTGGACA AGGAGTGGAA GCGCGCCCTG CGCGAGCGCT GGCCGGTGTC CGTGCTGATG
ATCGACGTCG ACGCCTTCAA GCCCTACAAC GATCACTACG GTCACCTGGG CGGCGACACC
GCCCTCAAGG CCGTCGCGCG CTGCATCCAG GCCCATGCCA GCCGATCCGG CGATCTCGCC
GCGCGCTATG GGGGCGAAGA ATTCTGCATC GTGCTGCCGC ACACGGATCT GGAGGGTGCG
ATCGCGGTCG CGGAGCACAT CCGCCAGGCC GTGCTAGCCC TGCATATTCC GCACGCGCAG
GGGCCGGCCG GCATCCTGAG CGTGAGCATC GGCGCGGCCA CCGACACGCC CGCGCTGTCG
GGCGACCGTG CCGAGACCCT GACCCAAGCG GCGGACACCC AGCTCTATCG CGCCAAGACG
CAGGGACGCA ACCGCACCAT GCCCACCGGC GCGGAGGCGG AGAACGCCCC GAAAACGACG
CCCGGCCACC CCGCCGTGCT TGCGGAGCAC GGCAGCTGA
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| Protein sequence | MSIFSINTPA RLIGTALLFS LTVSAGAALS LYEMRLDALK CAKDAGANIA LIIERDVARN
LELYSLSVET VLERLADPEV HQVSNHIRRL VLFDGVAQAR DLGSILVTDA RGQVVLDSKA
EPARNIHIGD RDYFQQQARI DSTAVLISKP LEARTGYGAS ITVSRRLNDA QGKFAGVVSG
ALRISYFNRL FSGMTLGPKG AIALFYADGT LIARRPAPPA AGAAEKRSPE ALKRVIDTTD
GLYLGKSVRD GIERLYTYRR IGHYPLYVAV GAATEDIYAN WTSRAWAIGL LVAVFNLVTM
ALAYQFAKQL EKRLAAGRRH AELAITDALT GLPNRRALDA FLDKEWKRAL RERWPVSVLM
IDVDAFKPYN DHYGHLGGDT ALKAVARCIQ AHASRSGDLA ARYGGEEFCI VLPHTDLEGA
IAVAEHIRQA VLALHIPHAQ GPAGILSVSI GAATDTPALS GDRAETLTQA ADTQLYRAKT
QGRNRTMPTG AEAENAPKTT PGHPAVLAEH GS
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