Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00815 |
Symbol | RSp0387 |
ID | 1222694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 490903 |
End bp | 491991 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240247 |
Product | hypothetical protein |
Protein accession | NP_521948 |
Protein GI | 17548608 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.491334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGAC AGCCCAAGCC CGGCAGGCGG CCTGACCTCG CGCTGGTCGT CATCGCGCGC AACGAGGCGG CCTGCATCGA GCGCTGCCTG CGCAGCGCCC GGCCCCATGT CGACCGCATG ATCGTGCTCG ACACGGGCTC AACCGACGCG ACCGTCGCCA TTGCCGAGGC CTGCGGCGCG CAGGTCCACC ATTTCACCTG GGTCGACGAT TTTTCCGCCG CCCGGAATGC CGCGCTGCAA TTCGCCGATG CCGACTGGAA CCTGGTGATG GATGCCGACG AGTGGCTGGA GAGCGGCGCC GGCGAACTGC GCGAAGCCTG CACGTTCGGC CCCCTGCTCG GGGTGGTCTG CATCCAGAGC CTGGACGATG CCGGCGGCGC GACGCAGCGG ACCAACACCT GGATTCCGCG CCTGCTGCCG CGCGGCGTCC GCTACCAGGG CCGCGTCCAC GAGCAGCCGG TCGCGTCGCT GCGGCGCGTG CGGCTGCCGC TGGTGTTCGG CCACGACGGC TACGTCAGCG CCAAGCTGGA AAAGAAGCGC GGCCGCAATG CCGCGCTGCT GCACGCGGAG CTGGCCGATC GCCCGGACGA TCCCTATGTC CTGTACCAAC TGGGCAAGGA AACGGAAATC AACGGCAAGG ACCCGGCACA AGCCGCCGAC CTGTATGCGC AGGCCGCTGC CGGCGCGCCG GCCAACGCGC CCTATCGGCA CGACGCCTGC ATCCGCCTGC TGCTGTGCCT GAGGCAATCG GGCCGGCTCG ACGAGGCGAT CACCCGCGCC GGCGAGTGGA TGGACACATG GGCCGCATCG CCCGATTACT TCTTCGTGCT CGGGCACCTC ATGTTCGATG CGGCGCTCAG GCACCCCGCC CAGGCCGCGG AGCACTGGCT GCCGATGGCG GAGCACGCCT TCCTGCGCTG CCTGGCCATC GGCGACCAGC CGAAACTCGA CGACAGCGTC TTCGGACGCG GCAGCTTCGC CGCGGCCGAG AACCTGGCCG TCGTCTACCG GGCCCTGAAC CAGCCCCTGA AAGCCGACGA ATACCAGGCG CTGTCGCAGC GCCTGAAGGC GGACCCGGCC GCGCGCTGA
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Protein sequence | MRRQPKPGRR PDLALVVIAR NEAACIERCL RSARPHVDRM IVLDTGSTDA TVAIAEACGA QVHHFTWVDD FSAARNAALQ FADADWNLVM DADEWLESGA GELREACTFG PLLGVVCIQS LDDAGGATQR TNTWIPRLLP RGVRYQGRVH EQPVASLRRV RLPLVFGHDG YVSAKLEKKR GRNAALLHAE LADRPDDPYV LYQLGKETEI NGKDPAQAAD LYAQAAAGAP ANAPYRHDAC IRLLLCLRQS GRLDEAITRA GEWMDTWAAS PDYFFVLGHL MFDAALRHPA QAAEHWLPMA EHAFLRCLAI GDQPKLDDSV FGRGSFAAAE NLAVVYRALN QPLKADEYQA LSQRLKADPA AR
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