| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00808 |
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| Symbol | RSp0380 |
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| ID | 1222687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 483449 |
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| End bp | 485185 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240240 |
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| Product | hypothetical protein |
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| Protein accession | NP_521941 |
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| Protein GI | 17548601 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAACG CGCTGACCGA GGGGCTCCTG GTGTGCGATG GGCAGCGCCG GATCACCTAT
GCCAACCCGA GCGCGGCGCG CCTGCTGGGC GTGCCGCTCG ACGCGCTGGT CGGCATGCGG
CTGCCGGAGG TGGTGGCATC GGCCATCGAC GAGTTCGATA CCCCCATCCG CGAGGTCGAC
TGGCCGGACG GCGAGGTGCT GGCCCAGGGC CAGCCCCAGC TCAACCAGAT CTTCGGCATG
CGCTGCCTGG ACGGGCGCAC CGTGTGGGTT TCCACCAACT GGACGCCGCT GTATGCCGAG
GCCGGCGAGC CGATGACGGC CGCGCCCGCG GCCCGCCACG CGCAGCCCTA TGCCGTGCTG
GTGTCGCTGG TCGACATCAC GCAGATCCGC GAGGCGCAGC AGCGCATCCG CCACCTGGCC
ACGCACGATA CGCTGACCGG CCTGCTGAAC CGCTGCGCGC TGGAAGACCG GCTGGAGCAC
GCGCTGGCGC TGGCGCGGCG CAACCGCTCG CGCGTGTCCG TGATGTTCCT CGACCTGGAC
CGCTTCAAGA ACGTCAACGA CACGCTGGGC CACCAGTTCG GCGACCAGCT CCTGCGCGAG
GTGGCCGCCC GCCTGCAGGC CTGCGCCCGC GAGGCCGACA CCGTGGCCCG CCTGGGCGGC
GACGAATTCG TCGTCATGCT GGAGTCGCTC GACGGCACGG GCACGCGCCG CGTGGCCGAG
CGCATCCTGG CGGCCATCGG CGCGCCGTTC CATATCGACG GGCAGGAGCT GTTCCTGGGC
GTGTCGATCG GCATCGCCGT GGCGCCGCAC GATGGCGACG ACCCCAACAC GCTGCTGCGC
AAGGCCGACG CCGCCATGTA CCTGGCCAAG GAGCGCGGCC GCAACAACTT CCAGACCTTC
ACCAGCGACC TGGACGACCG CGTCTCGCGG CGCTTCCGCA TCGAATCGGG CCTGCGCCGC
GCCAGCGACC GCAACGAGTT CTACGCCAAC TACCAGCCGC GGGTGGACGT CCGCACCGGC
CGCATCGTCG GGGTGGAGGC GCTGATCCGC TGGAATTCCA CCGATTTCGG GCGCCTGATG
CCCGGCCAGT TCATCCAGGA TGCCGAAGAG ACCGGCCTGA TCGTCGAGAT CGACCGCTGG
ATCCTGCGCG CCGCCTGCGA CCAGCTGGCG CGCTGGCGCC GCATCGGGCT GCCGCACCTG
CGCATGTCGA TCAACCTGTC GGGGCAGGCG TTCAGCTCCG GCCAGCTGAG CGGCATGGTG
CGGGGCGCGC TGACGAGCAG CGGCCTGCCG GGCGAGGCCG TCGAGCTGGA GATGACCGAA
GGCATCCTGA TCCGCGATGA TCCGTCGCTG CACACGCTGC TGACCGAGCT GCGGGCACTG
GGCGTGTCCC TGGCGCTGGA CGATTTCGGC ACGGGGTATT CGTCGCTGTC CTATCTGCAC
CGCTTCCCGA TCGATACCCT CAAGATCGAC CGCTCGTTCG TGCAGGACCT GCCCCACGTG
GCCGAACGCG CGGCCATCAC CCGGGCCATC ATCATGATGG CGCAGGCGAT GGGCATGAAG
ACCGTGGCCG AGGGCGTGGA GACCGCCGGG CAGCTCGAAT TCCTGAGCGA GATCGGTTGC
GACGAGTACC AGGGCTACCT GCTGACGCGG CCGCTGGAGC CGGCCGCCAT GCACGACCTC
GTGCGCGAGC ACGAGCGGCG CTACGGCGCG GCGCGGCCGG GTTTCCTGCC GCTGTAA
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| Protein sequence | MVNALTEGLL VCDGQRRITY ANPSAARLLG VPLDALVGMR LPEVVASAID EFDTPIREVD
WPDGEVLAQG QPQLNQIFGM RCLDGRTVWV STNWTPLYAE AGEPMTAAPA ARHAQPYAVL
VSLVDITQIR EAQQRIRHLA THDTLTGLLN RCALEDRLEH ALALARRNRS RVSVMFLDLD
RFKNVNDTLG HQFGDQLLRE VAARLQACAR EADTVARLGG DEFVVMLESL DGTGTRRVAE
RILAAIGAPF HIDGQELFLG VSIGIAVAPH DGDDPNTLLR KADAAMYLAK ERGRNNFQTF
TSDLDDRVSR RFRIESGLRR ASDRNEFYAN YQPRVDVRTG RIVGVEALIR WNSTDFGRLM
PGQFIQDAEE TGLIVEIDRW ILRAACDQLA RWRRIGLPHL RMSINLSGQA FSSGQLSGMV
RGALTSSGLP GEAVELEMTE GILIRDDPSL HTLLTELRAL GVSLALDDFG TGYSSLSYLH
RFPIDTLKID RSFVQDLPHV AERAAITRAI IMMAQAMGMK TVAEGVETAG QLEFLSEIGC
DEYQGYLLTR PLEPAAMHDL VREHERRYGA ARPGFLPL
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