Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00406 |
Symbol | RSp0527 |
ID | 1222834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 657539 |
End bp | 658048 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240387 |
Product | hypothetical protein |
Protein accession | NP_522088 |
Protein GI | 17548748 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00357564 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCC CCATCCTGTC TCCGTCGCTG CTGTCGGCGC GCGCGTTTGC GCGCGGCACG CGCGTGCGCG GCGTGCGATG GATCATGGTG GTCTGGTGCC TGCTGTTCAC GGTGTCGGTG TTCTCCGCCA CGCATTTCCC CGATGGGCAG GCCGCGGACG ATGCGCTCGA AACCATCGAG GCCGTGTTCG ACGGCACGCT GGGCGACCCG ACGCAGCCGG CCGTGTCCAA GACCGTGTTC GAGCGCACGC TCGCCGGCAC CACGATCAAG CTGCCCGGCC AATGCGCCGA TTCGCATCCC TGGTTTGCCA AGGCGCAGGC CGTGCCGGAT GCCCCCTCCA GCAATGCCGT GACCTCCGAC GCGCCGAGCG ACGCGCCGGA GCTCTGGCTT CCGCCGCCTG CCTTGCCGCT CGCGCCCGCG CTGCGCGTGG CGCGTGCCCG TCCCGCGTTG CCTCTCTTCC GGCCCGGTCC CGCACCGGAG CCGATGCTGC GCCCGCCCGC GCACGTCTGA
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Protein sequence | MSAPILSPSL LSARAFARGT RVRGVRWIMV VWCLLFTVSV FSATHFPDGQ AADDALETIE AVFDGTLGDP TQPAVSKTVF ERTLAGTTIK LPGQCADSHP WFAKAQAVPD APSSNAVTSD APSDAPELWL PPPALPLAPA LRVARARPAL PLFRPGPAPE PMLRPPAHV
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