Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00404 |
Symbol | RSp0525 |
ID | 1222832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 656223 |
End bp | 656834 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240385 |
Product | hypothetical protein |
Protein accession | NP_522086 |
Protein GI | 17548746 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000519632 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG CAATCATCGG CGCCACCGGG CGCGTCGGCA CCCGACTGAT CGACGAAGCG CTGCGCCGCG GCCACCAGGT CACGGCCATC GCGCGCACGG CGTCCAAGCT GCCGGCCCGT GCCGGACTGA CGACCAAGGA CGCGGATGTG GCCGACCAGG CCGCCCTGGC CGCCGCGCTG GCGGGCCATG ACGTGGTGTT CAGCACCGTG CGCTTCCTGC AGACCAGCGC CGACCAGATC GTCGGCGCCG TCAAGCAGGC CGGCGTACCG CGCCTGCTGG TGGTGGGCGG CGCAGGCAGC CTGGAAGTGG CGCCGGGCGT GGCCCTGATC GACACGCCGC AATTCCCGAA GGAATACTTC GACGAAGCCT CGGCCGGCCG CGACTTCCTG AATGCGCTGC GCAAGGAAAG CGCGCTGGAC TGGACCTTCG TCTCGCCCGC CGCCTTCTTC GAGCCGGGCG AGCGCACCGG CCACTTCCGG CTGGGCAAGG ACACGCTGCT GGCGGATGCC GGCGGCAAGA GCTGGATCTC GATGGAAGAC TACGCCATCG CCTTCCTCGA CGAAACCGAG CGCCCGGCGC ATTCGCGCCA GCGCTTCACG GTCGCCTATT GA
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Protein sequence | MKIAIIGATG RVGTRLIDEA LRRGHQVTAI ARTASKLPAR AGLTTKDADV ADQAALAAAL AGHDVVFSTV RFLQTSADQI VGAVKQAGVP RLLVVGGAGS LEVAPGVALI DTPQFPKEYF DEASAGRDFL NALRKESALD WTFVSPAAFF EPGERTGHFR LGKDTLLADA GGKSWISMED YAIAFLDETE RPAHSRQRFT VAY
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