Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00379 |
Symbol | RSp0500 |
ID | 1222807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 623090 |
End bp | 624280 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637240360 |
Product | hypothetical protein |
Protein accession | NP_522061 |
Protein GI | 17548721 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.917733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCAT TGTTGTCGCC GCAATTTGCG AAAGAATCAT GGGGTAAGCA AGCGACAGAG CTGGCCATAT CGCAGATCCC ATTCAACGAT CAAGATGTGC TGGGGGCGCT CAAGGAATAT GCGATGTGCG CGAACGACCT TCGATCCCGC AACGCTCAGT CCGAAGCCAT CACCGTTTTC AATGGAAAGC GCACGTCAGC GCCGCGCCCT GATTTTCTTG CGCTTCCCGC TGATCACACA CTCGACGATT ATGTATCGAG AATTGGGCGC CTTGCTGGCA ACGACGAGTG GGCGGTCATG TACTATGGGC TTCATGCGGC AAGCCCCAAC ATCTGGGATG TTGCCAAAGC TTTTTCCGAC CAGCTCGCCT TGTCAATAGG CTATCGTCCT GGTGGCCGCG TCGATATTGA TTGCTTTATC GGGCGATATT CATCCACCTA TGTTGGGATC CATGCGGATC ATGCGCATAA CTTCGGGTTC ACCTTGCGCG ATGGAAAAAC GATGTTCACC TGGCCCGGAA CCCGGTCGGA TCTCATTGGC GTGCGATTTC CAGACTATGA ATCATTCAAG TCCGAAGGCA TTCCACTTGA GAACAAAACG AATCGAGTCA CCTATTTCCC TGAGGACTGG CTTCACGTTG CCGAAACAAA ATCCGATGTC TCGATCAACG TGAATATCGC TTTTTGGGAA ACCGGCAACG ATTCTCAGCA AAACGCGAAC TACGTGAAGG GCCTGCTCCA GGCACCCAAT CGTACCCGCC ATGACGTGCG TTCCTCAGGC ATCGCGAGCC TGAACCCCGA TGATGCGCTG CTGCTTTCAT CCCTGAAGGC CCTGCTTGAC GGCGCGTCTC TGAAAAGACG CATGATGATT TCTCAGCTCA TCTCGGACAC CAGCAGCCGC TTGAATGTCG GCCGTCCAAT CGTCGAAGTC GAAGCACTGG ACGATGTCAT CGCCCTCAAC GCCGTCAGCA CCCTGCAATG GATACCGGTG TTGCAGGAGG GAGAGGTCCT GGTCGCGGCC AACGGCCACT GCGGCAGCTT CAGATACAGC CGCGCATTGC ACGACTTTCT GAATTGCCTG TCCGCCGGTC AGCCAGTGAA CATTTCGGAT CGATCGAGCG GGAAAGACAG GCTGCTTAAC GATGATCTCC TGAGTGTTGC CGCATCGCTG GCGCGGTGGG GAGCGCTTTG A
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Protein sequence | MAALLSPQFA KESWGKQATE LAISQIPFND QDVLGALKEY AMCANDLRSR NAQSEAITVF NGKRTSAPRP DFLALPADHT LDDYVSRIGR LAGNDEWAVM YYGLHAASPN IWDVAKAFSD QLALSIGYRP GGRVDIDCFI GRYSSTYVGI HADHAHNFGF TLRDGKTMFT WPGTRSDLIG VRFPDYESFK SEGIPLENKT NRVTYFPEDW LHVAETKSDV SINVNIAFWE TGNDSQQNAN YVKGLLQAPN RTRHDVRSSG IASLNPDDAL LLSSLKALLD GASLKRRMMI SQLISDTSSR LNVGRPIVEV EALDDVIALN AVSTLQWIPV LQEGEVLVAA NGHCGSFRYS RALHDFLNCL SAGQPVNISD RSSGKDRLLN DDLLSVAASL ARWGAL
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