Gene RS00379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS00379 
SymbolRSp0500 
ID1222807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp623090 
End bp624280 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content55% 
IMG OID637240360 
Producthypothetical protein 
Protein accessionNP_522061 
Protein GI17548721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.917733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAT TGTTGTCGCC GCAATTTGCG AAAGAATCAT GGGGTAAGCA AGCGACAGAG 
CTGGCCATAT CGCAGATCCC ATTCAACGAT CAAGATGTGC TGGGGGCGCT CAAGGAATAT
GCGATGTGCG CGAACGACCT TCGATCCCGC AACGCTCAGT CCGAAGCCAT CACCGTTTTC
AATGGAAAGC GCACGTCAGC GCCGCGCCCT GATTTTCTTG CGCTTCCCGC TGATCACACA
CTCGACGATT ATGTATCGAG AATTGGGCGC CTTGCTGGCA ACGACGAGTG GGCGGTCATG
TACTATGGGC TTCATGCGGC AAGCCCCAAC ATCTGGGATG TTGCCAAAGC TTTTTCCGAC
CAGCTCGCCT TGTCAATAGG CTATCGTCCT GGTGGCCGCG TCGATATTGA TTGCTTTATC
GGGCGATATT CATCCACCTA TGTTGGGATC CATGCGGATC ATGCGCATAA CTTCGGGTTC
ACCTTGCGCG ATGGAAAAAC GATGTTCACC TGGCCCGGAA CCCGGTCGGA TCTCATTGGC
GTGCGATTTC CAGACTATGA ATCATTCAAG TCCGAAGGCA TTCCACTTGA GAACAAAACG
AATCGAGTCA CCTATTTCCC TGAGGACTGG CTTCACGTTG CCGAAACAAA ATCCGATGTC
TCGATCAACG TGAATATCGC TTTTTGGGAA ACCGGCAACG ATTCTCAGCA AAACGCGAAC
TACGTGAAGG GCCTGCTCCA GGCACCCAAT CGTACCCGCC ATGACGTGCG TTCCTCAGGC
ATCGCGAGCC TGAACCCCGA TGATGCGCTG CTGCTTTCAT CCCTGAAGGC CCTGCTTGAC
GGCGCGTCTC TGAAAAGACG CATGATGATT TCTCAGCTCA TCTCGGACAC CAGCAGCCGC
TTGAATGTCG GCCGTCCAAT CGTCGAAGTC GAAGCACTGG ACGATGTCAT CGCCCTCAAC
GCCGTCAGCA CCCTGCAATG GATACCGGTG TTGCAGGAGG GAGAGGTCCT GGTCGCGGCC
AACGGCCACT GCGGCAGCTT CAGATACAGC CGCGCATTGC ACGACTTTCT GAATTGCCTG
TCCGCCGGTC AGCCAGTGAA CATTTCGGAT CGATCGAGCG GGAAAGACAG GCTGCTTAAC
GATGATCTCC TGAGTGTTGC CGCATCGCTG GCGCGGTGGG GAGCGCTTTG A
 
Protein sequence
MAALLSPQFA KESWGKQATE LAISQIPFND QDVLGALKEY AMCANDLRSR NAQSEAITVF 
NGKRTSAPRP DFLALPADHT LDDYVSRIGR LAGNDEWAVM YYGLHAASPN IWDVAKAFSD
QLALSIGYRP GGRVDIDCFI GRYSSTYVGI HADHAHNFGF TLRDGKTMFT WPGTRSDLIG
VRFPDYESFK SEGIPLENKT NRVTYFPEDW LHVAETKSDV SINVNIAFWE TGNDSQQNAN
YVKGLLQAPN RTRHDVRSSG IASLNPDDAL LLSSLKALLD GASLKRRMMI SQLISDTSSR
LNVGRPIVEV EALDDVIALN AVSTLQWIPV LQEGEVLVAA NGHCGSFRYS RALHDFLNCL
SAGQPVNISD RSSGKDRLLN DDLLSVAASL ARWGAL