| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00358 |
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| Symbol | RSp0480 |
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| ID | 1222787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 601423 |
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| End bp | 602211 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240340 |
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| Product | amino acid ABC transporter transmembrane protein |
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| Protein accession | NP_522041 |
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| Protein GI | 17548701 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCA TCTTTGCAAG CTGGCCGGTC GGGTGGAGCC GGCAGCAGCG CAGCACGCTG
GCGATGGCCG CGGCGGCGGC GCTGCTGCTG GTGCTGCTGT GGCTGATCGC CATTCCGCTG
GCGGCGGCGC CCGAGCCGAT CGCCGCCAAT GCCCAGATCT TTGCCGACGG CACGCGCACC
ACCGTCAAGC TGACGCTGGC CTCAGCCCTG GCGGGCGTGC TGCTGGGCAT CGTGGCGGCG
CTGGGCAAGC TCTCGCCGGT GTCGCTGCTG CGGCAGGCGG CGTCGTTCTA TATCTGGGTG
ATCCGGGGCA CGCCGCTGCT GGTGCAGATC CTGTTCGTCT TCCTGGCGCT GCCGGCCTGG
CTGCCGTGGC TGCAGATGGA CGACTTCACC TCGGCCTGCG TGGCGCTGGC CTTCAACGCC
GGTGCCTACA ACGCCGAATC GATCCGCGCG GGGCTGCTGG CGGTGCCGAA GGGCCAGTTG
GAGGCCGCGC ACTCGCTCGG CCTGTCGCGC TGGCACACCT TTGCCGACGT GATCTTTCCC
CAGGCGTTCA AGGTTGCCCT GCCGCCGCTG GTCAACAACT TCATCTCGCT GCTCAAGGAC
TCCTCGCTGG CGTATGCGAT CGGGGTGGTG GAGCTGACCA ACGTCGGCAA CCGCCTGCAG
GCCGCCACCT TCCAGCCGCT GCCGGCCCTG GTGACGACGG CCGTCATCTA CCTGGCCCTG
ACTACGGTGC TGACCCAGTT CTCCAATGCC GTGGAACAAC GCATGGACGT GGAGGGCCGT
CGGCGATGA
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| Protein sequence | MTFIFASWPV GWSRQQRSTL AMAAAAALLL VLLWLIAIPL AAAPEPIAAN AQIFADGTRT
TVKLTLASAL AGVLLGIVAA LGKLSPVSLL RQAASFYIWV IRGTPLLVQI LFVFLALPAW
LPWLQMDDFT SACVALAFNA GAYNAESIRA GLLAVPKGQL EAAHSLGLSR WHTFADVIFP
QAFKVALPPL VNNFISLLKD SSLAYAIGVV ELTNVGNRLQ AATFQPLPAL VTTAVIYLAL
TTVLTQFSNA VEQRMDVEGR RR
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