Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3426 |
Symbol | |
ID | 1222290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3698062 |
End bp | 3699222 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637239843 |
Product | hypothetical protein |
Protein accession | NP_521545 |
Protein GI | 17548143 |
COG category | [S] Function unknown |
COG ID | [COG4104] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.967185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCAT TGCTTGCGGC TGCACGGCTC GGCGACCCGG TTGCACATAC CGCGTCGAAG GGCTGGATGA TGGCGGGCCT GATTGCCGGT GCGCTCATCG GTGCTGCTGC CGTGGTCGTG ACGGGCGGTG CGGCACTGAC CTTGGTGGCA GCCGCAGCAG CCGGTGCCGC AGCCGGCGGC GGTCTTGGCG AAGTGCTTGG CACGATGTCC TGGGCGCCGC GGCATGTCAC GGGAAGCCTG ATATCGGGAT CGTTCAACGT CTTCGTCAAC GGTCGACCAG CAGTCCGTGC CCATCTAAGC CAGGGAATCT GCAGCGATCA TCCCGGCTCA CCCCAGCTTG TCGCTCAGGG CTCGTCGACG GTCTTCATCA ACGGTCAGCC TGCAGCCCGC ATGGAGGACA TGCTGACGTG CAGTGCGGTG ATCAGTGCCG GGTCACCGGA CGTCTTTATC GGCGGCGCCA CCGTGACCAC GGATGACATC AGTCCGGAGA TTCCGGGGTG GGTCAACTGG ACGATGCTGG CTGTCGGTGT AGCCGCTGCG GCGGTTCTTG CAGGCCCTCT GGTCGCCGCC TTGGGAACCG TCGGGGGTAT TGCTGGTGGT GAAGCGGGAT CGTGGCTCGG GGGCAAGTTC TTTGGAGACG GGTCAGACGG GCAGAAATGG TCGATGCTCG GTGGTAGCTT GCTGGGAGGG CTAGCGGGAG CGAAGGGTGC CAATGCCTGG TCCAAAACCA CGGGAACAAT ATCTGCCGAG CCAAATAGAT TCTTCGGAGC AAGGGGACCA GCCAGTGGCC GTGAGTTCGA TCCAACACGA GCCGGCGGGC CCATTCGCCA GTTGAGTACA GACAGCTTTC AGATTACACA CGAAGGAATC GATGCTGTTC AAAGGCACGT TTCTAGATTT GGCCAAGACA ACGCGAATGA CTTTATGGTT AATCGACTTA GAAACATAGC AGATGGAAAT TCTGAGGCGA CTCAATACGA TAAAAATTTC TATACTCATG AGCTGGCCGA ATTCGAGCGA TACACGAATC TTGGCTGGGA GGTCGGGCAG CCGACCGACC CAATGGAGGC TTATGATTTG TGGAACAATA CACATACTGC AACATTGGAA GATTTCGGCC TGAAGGATGG CCAACTTTAT CACCCAGACG CACCACAATG A
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Protein sequence | MSALLAAARL GDPVAHTASK GWMMAGLIAG ALIGAAAVVV TGGAALTLVA AAAAGAAAGG GLGEVLGTMS WAPRHVTGSL ISGSFNVFVN GRPAVRAHLS QGICSDHPGS PQLVAQGSST VFINGQPAAR MEDMLTCSAV ISAGSPDVFI GGATVTTDDI SPEIPGWVNW TMLAVGVAAA AVLAGPLVAA LGTVGGIAGG EAGSWLGGKF FGDGSDGQKW SMLGGSLLGG LAGAKGANAW SKTTGTISAE PNRFFGARGP ASGREFDPTR AGGPIRQLST DSFQITHEGI DAVQRHVSRF GQDNANDFMV NRLRNIADGN SEATQYDKNF YTHELAEFER YTNLGWEVGQ PTDPMEAYDL WNNTHTATLE DFGLKDGQLY HPDAPQ
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