Gene RSc3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3399 
Symbol 
ID1222263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3667849 
End bp3669060 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content72% 
IMG OID637239816 
Producthypothetical protein 
Protein accessionNP_521518 
Protein GI17548116 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3213] Uncharacterized protein involved in response to NO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC CGGCTCCGCT CCTGAACATC GGCCAGCCTG ATCCGGCCAG CCGCGTACCG 
TACACCGGCC TGCCGGTCTT TGCCCTCGGC TTCCGGCCGT TCTATCTGCT GGCCGCGGCG
TTTGCGGTGA TCGGCATGGC GCTGTGGGCG GCGCTGCTGC TGGGCGGGTT CTCCGCCGCG
CACGGCCCCA CGCTGCCGCC GTTGTTCTGG CATGCGCACG AGATGGTGTT CGGCGTTGCG
GCGGCGGTGG TGGTGGGCTT CCTGTTCACG GCCGGCAAGA ACTGGACCGG GCTGCAGACG
CCGCAAGGCC CGCTGCTGGC GGCGCTCGCG GCCGTCTGGC TGGCGGCGCG CATACTGATG
TGGACCGGCC CGGGGCCGCT GGCCGTGGCG GTCGATGTCG CGTTCCTGCC GCTGTGCGGC
GTGCTGTTCC TGCGCATCCT GCGGCGCGCG GCGAATGCGC GCAATTATGG TCTTGCGGCG
GCCCTGCTGA TCCTGGGCGC CGTCAACGCC GGCTTCCATT TCGCGCTGAT GGCCGGCGCA
CCGCTGCTCG CCCTGCGCTG CGTCGACGCG GCGGCCGGAC TGGTCGCCAT GTTCGTCACG
GTGATCGGCG GGCGCGTGAT CCCGATGTTC TCCACCAATG CCATTCCCGG CATCCGCATC
CGGCGTGCCG CGTGGGCCGA GCGCGCCATC GTGCCGCTGA CGCTGGCGGC GGTGATCGTG
CTGGCCTTGC CGGTGAGCGG CGTGGTGCCG GCCGCCGTGT TCGCGTCGGC GGCCGTGGCC
CAGGTGGTCC GGTGGGTAGG CTGGAATTCG GTGCGGACCC TGCGCACGCC CATCGTTGCC
ATTCTGCATG TCGCCTATGG CTTCCTGCCG CTCGGGTTCG GCCTGCTCGC CGTGTCGGCT
CTGGGCGGGA TCGACCGTTC GACCGCGCTG CACGCGCTGA CGGTCGGCGC CATCGGCGGG
GCGATCGTCG CCATGATCAC GCGCACGGCA CTCGGCCATA CCGGCCGCCC GCTGCGCGCG
GGCCACGCGG AGCGCCTCGC CTATGCGGCC ATCGCGCTGG CGGCGCTGGT GCGCGTGGTC
GGGCCGCTGC TGCTGCCGCG CGGCATCTGG ATCGGCGTGT CGTCGGCAGG CTGGGTGGTG
GCGTTCGCCG TCTATCTGTG GAAATACACG CCGTGGTTGC TCGCGCCGCG CGTTGACGGA
CGCGACGGCT GA
 
Protein sequence
MPRPAPLLNI GQPDPASRVP YTGLPVFALG FRPFYLLAAA FAVIGMALWA ALLLGGFSAA 
HGPTLPPLFW HAHEMVFGVA AAVVVGFLFT AGKNWTGLQT PQGPLLAALA AVWLAARILM
WTGPGPLAVA VDVAFLPLCG VLFLRILRRA ANARNYGLAA ALLILGAVNA GFHFALMAGA
PLLALRCVDA AAGLVAMFVT VIGGRVIPMF STNAIPGIRI RRAAWAERAI VPLTLAAVIV
LALPVSGVVP AAVFASAAVA QVVRWVGWNS VRTLRTPIVA ILHVAYGFLP LGFGLLAVSA
LGGIDRSTAL HALTVGAIGG AIVAMITRTA LGHTGRPLRA GHAERLAYAA IALAALVRVV
GPLLLPRGIW IGVSSAGWVV AFAVYLWKYT PWLLAPRVDG RDG