| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3394 |
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| Symbol | |
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| ID | 1222258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3660547 |
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| End bp | 3663411 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239811 |
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| Product | putative restriction modification enzyme R subunit protein |
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| Protein accession | NP_521513 |
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| Protein GI | 17548111 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCA TTGACCGCCG GCCCGTACGC GAGGCGGCGA CCCGCCGCCC GGACGTCGCC
GCCTCGGAAA GCCAGACCGC TGCCTGCGGC GATGCGATCG ACCGCCTGCT GCACGCGGCC
GGCTGGCCGC TCACCGGCCC GGACGATACG GCGTTTCCCC TCGCCGGCCT GCCCACGCCC
CCGGGCAAGG CCTATGTGGA CTACGTGCTC TGGGACGACC GCCGCAAGCC GCTCGCCATC
GTCGAAGCCC GGCACACGCG GCGCAATACC CGCGCCGGCC AGCAGCGCGC CCGGCAGTAC
GCAGACGGCC TGGAAGCCCT GACCGGACAG CGGCCGCTGA TCTACTACAC CAACGGCCGC
GACCACTGGT TCTGGGACGA TCGCGCCGGC CCGCCGCGTG CCGTGCAGGG CTTCCACCGC
CAGGACGAGC TGGAACGGCT ACTCGGGTGC CGCACGCACC GGCAGCCGCT GGCCACGGCC
GCCATCGATA CCGCCATCGC CGGGCGGCCC TACCAGCACC GCGCCATCCG ACGCATCGCG
GAAGCGTTCG AGCAGGACCG GCTGCGCGCG GCCCTGGTCT CGATGGCCCC CGGCACCGGC
AAGACCCGCA CGGCGATCGC CCTGACCGAG CTGCTGATGC GCTGCCGCTG GATCAAGCGC
ACGCTGTTCC TGGCCGACCG CACAGCGCAG CTCACGCGGG CGGCGGCGGC CTTCGCGGCG
CACCTGCCGC AAGCCACGCT GGTCAACCTG GCCAAGGACG CCGGGGCGGA TGGCGACGTC
TATCTCTCCA CCTGTCCGAC CATGCAGGAC CGGATCGCGC ATCCGATCGA CACGGTCCCG
CGCTTCGGCC CCGGCCACTT CGACCTGGTG ATCGTGAACA TTGCGCACCG TGGCATCTGC
CGGCGACACC GCGCCATCTT TTCGCATTTC GATGCGCTGC GGGTCGGCCT GACTGCCATG
CCCGAGGACG AGATCGATCG CGACACCTAC CGCCTGTTCG ACCTGGAAAC GGGCATCCCC
ACGGACGCCT ACGACCTGGA CGAGGCCATC GCTGATCACC ATCTCGTACC GCCGCGCGCA
GTCTGCGTTC CGGTCCGGCA GCCGCGCGGG GGCATGGCCT ACGACGCCCT GTCCGACGCA
GAGAAAGACC ACGGGGATGC CCTGGAATGG AACGACAACG GCCACGCGAA TACGGCGGTG
CCCGATACCG CCGACGCCTG CCTGCACCAC CAGGACACCG TCGACGCGAT GATCGCGCTC
GTGATGGAGA AACGCGGTCG TCGCGTGGCG GACGGTGACT GGATCGGCAA GACCCTCATC
TTCGCCAGCA ACCACGACCA CGCGCGCTTC ATCGCCGGCC GCTTCGACGC CAACTATCCG
CAATACAAGG GCCGGCTGGC ATGCGTGATC ACGTACGAAG CCGGGCAAGC GCAAACCCTG
ATCGACGCCT TCTCGGTGGC CGACCGGATG CCGCGCGTCG CCATTGCGGC CGGCCTGCTC
GACACCGGCA TCGCGGTGCC GGAAGTGGTG AACCTCGTGT TCTTCAGGCT GGTACGCTCC
AAGGCCAGGT TCCGGCAGAT GGTCGGCTGC GGCACACGGC CGTGCAAGAA CCTGTACGGG
CCGGGACAGG ACAAGCAGGA CGTCCTGCTC TTCGACTTCT GCCAGAACCT GGCCTTCTTC
GATATGCGCC TCGAAGCGGC GGCCGAAACC ATGCCCGTGC CGCTGGAGCA GCGCCTGTTC
CGGGCACGGC TCGAACTGCT GGCCCGCCTG GAGACGCGGC CGGCCGGCCT CAGCGTCCGG
GAAGCGGGCG CCAGCTATGG CAATCCGCCG ACCCCGGCGG CATTGCACGA CGACGTCGCG
CAATGGCTGC ACCGGCAGGT CGCGTCGATG TCGACCGACA ACTTCGCGGT GCGCGCCAAG
CACCGGCACA TCGCGCCCTA TGTCCACCGG GAAGCCTGGC AGCGCCTCGG TCCCGCACAA
GCCGCGGAAC TGTCGGAGCA CGTCTGCGGC CTGCCCACCA CGCTGCTCGA CGACAGCGAC
GAGGCGGCCA GGCGCTTCGA CCTGCTGATG CTGCGCCTGC AGCTATGCGT GCTGCGCGGC
GAATCGGCGC CTGGGCACCT GAAGCGGCCG GTGCGCGGCG TGGCAAGGGC ATTGCTCGCG
CAAACGGGCC TTCCCGCCGT GCACGACCAG GCCGGGTGGA TCCAAGCCAT CGCGGAGGAG
GGCTGGTGGG ACGATGCCTC CGTGCTCCTG CTGGAGCAGG CACGGCGGCG CCTGCGCGCG
CTCGTCCATT TGACCGACGC GCAGACGCGC TGGCAGTTGG CCTGCACCGA CCCGACCGAT
GCACCAGGCC CGGCCAGCGC GATCGCCACG GCGGCATGCG CCGACGACAC CAGCTTCGCG
CGCTTTCGCA CGAACGTTTG CCGATGCCTG CGTGCACACG CACGGCATCC GACACTGCAC
AAGCTGCGGC ACAACGCGCC ATTGACCACC GCCGACCTGG CCGGGCTGGA ACAGATGCTG
GCGGCCAACG GCGTCGGCGA CAGGGAAGCG ATCGATCGCG CGCGGCGTGC GTCCGGCGGG
CTGGGCGTCT TCGTGCGCGG GCTGATCGGC CTGGATCGGG AGGCCGCGCG CGCGGCACTC
TCCGGCGCCA TCACCAGCGA AGCGATGACG GCCGACCAGT GCGACTTCAT CGATCTGGTC
GTCACGCACC TGACCATGCA CGGCGTGATG GAAGCCGCGC GCCTGTATGC ATCGCCGTTC
ACCGACATCG CACCGCAAGG TCCGGACAGC CTGTTCGCGC CCGAGACAGT CGACGCACTG
GTCACCGCCC TGCAGCAGAT CACGGCGCGC GCCGTCGCGG CCTAG
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| Protein sequence | MSSIDRRPVR EAATRRPDVA ASESQTAACG DAIDRLLHAA GWPLTGPDDT AFPLAGLPTP
PGKAYVDYVL WDDRRKPLAI VEARHTRRNT RAGQQRARQY ADGLEALTGQ RPLIYYTNGR
DHWFWDDRAG PPRAVQGFHR QDELERLLGC RTHRQPLATA AIDTAIAGRP YQHRAIRRIA
EAFEQDRLRA ALVSMAPGTG KTRTAIALTE LLMRCRWIKR TLFLADRTAQ LTRAAAAFAA
HLPQATLVNL AKDAGADGDV YLSTCPTMQD RIAHPIDTVP RFGPGHFDLV IVNIAHRGIC
RRHRAIFSHF DALRVGLTAM PEDEIDRDTY RLFDLETGIP TDAYDLDEAI ADHHLVPPRA
VCVPVRQPRG GMAYDALSDA EKDHGDALEW NDNGHANTAV PDTADACLHH QDTVDAMIAL
VMEKRGRRVA DGDWIGKTLI FASNHDHARF IAGRFDANYP QYKGRLACVI TYEAGQAQTL
IDAFSVADRM PRVAIAAGLL DTGIAVPEVV NLVFFRLVRS KARFRQMVGC GTRPCKNLYG
PGQDKQDVLL FDFCQNLAFF DMRLEAAAET MPVPLEQRLF RARLELLARL ETRPAGLSVR
EAGASYGNPP TPAALHDDVA QWLHRQVASM STDNFAVRAK HRHIAPYVHR EAWQRLGPAQ
AAELSEHVCG LPTTLLDDSD EAARRFDLLM LRLQLCVLRG ESAPGHLKRP VRGVARALLA
QTGLPAVHDQ AGWIQAIAEE GWWDDASVLL LEQARRRLRA LVHLTDAQTR WQLACTDPTD
APGPASAIAT AACADDTSFA RFRTNVCRCL RAHARHPTLH KLRHNAPLTT ADLAGLEQML
AANGVGDREA IDRARRASGG LGVFVRGLIG LDREAARAAL SGAITSEAMT ADQCDFIDLV
VTHLTMHGVM EAARLYASPF TDIAPQGPDS LFAPETVDAL VTALQQITAR AVAA
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