| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3385 |
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| Symbol | kdpD |
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| ID | 1222249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3646636 |
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| End bp | 3649449 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637239802 |
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| Product | two-component sensor kinase KDPD transcription regulator protein |
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| Protein accession | NP_521504 |
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| Protein GI | 17548102 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAA CCCGCCCCAA CCCCGACACC CTCCTCGCCG AGCTCCAATC CGGCGAGGAG
AAAGCCGCTC GCGGCAAGCT GCGCATCTAT TTCGGCGCGT CGGCGGGCGT CGGCAAGACG
TACGCGATGC TGTCGGCCGC CAAGGTCGCG CGGGCCGAGG GCATCGATGT GGTCGTCGGG
CTGGTCGAGA CCCACGGCCG CGCCGAGACC GCCGCGCTGG TGGAGGGCCT GGAGCACCTG
CCGCCGCGCC AGGTCGAGTA TCGCGGTCGC ACCCTGCCCG AGTTCGACCT GGACGCCGCG
CTGGCCCGCA AGCCCGCGCT GATCCTCGTC GATGAGCTCG CGCATTCCAA CGTGGCCGGC
TCGCGTCACC CCAAGCGCTG GCAGGACATC GAAGACCTGC TCGCCGCCGG GATCGACGTG
TGGACCACGG TCAACGTGCA GCATCTCGAC AGCCTGAACG AGGCGGTCGG CAGCATTACC
GGCATCCGCG TGTGGGAGAC GGTGCCGGAT GCGGTTTTCG ACAGCGCGGC CGAGGTGATC
CTCGTCGACC TGCCCGCCGA CGAGCTGCTG CGCCGCCTGG CCGAGGGCAA GGTCTACCTG
CCCGAGCAGG CCCGGCACGC GGCGCGCAAC TTCTTCCGCA AGGGCAACCT GATCGCGCTG
CGCGAGCTGG CGCTGCGCCG CACCGCCGAC CGCGTCGACG ACGACGTGCA GGCCTATCGC
CGCGCGCGCC GCATCGAGAA CGTCTGGCGC ACGCGCGAGA CCATCGTCGC CTGCCTCGAC
CCGCAGGGCG ACGGCGAGCA GGTGATCCGC AGCGCCGCGC GCCTGGCCGC GCAGCTCGAA
TGCGACTGGC ACGCGGTGGC CGTGGTGATG CCGCACCTGC GCGCCGCCGA TGCGCGCGCC
GAGCGGCTGC ACGCGCTGCT CAAGATGGCC GAGGACGCCG GCGCCAGGAT CGAGACGCTG
GCCGGCACCA ACGCGGTGGA GGCCATCACC GGCTATGTCC GTCGCCACAA CATCACCAAG
GTCGTGGTCG GCCGCCCGCC GGCCAGGCGC TGGCGCTCGG CGCGGGCCAT CGTCGTGGCG
CTGCGCCTGG CGATCGGGCT GGAGCGTCGC CTGCCGAGCG GTGATTTTGC CGAGGCGCTG
GCGCGGCAGT GCCCGGAGGT GGATGTGATC CGCGCCGCCG CCGATCCGGC GCGCGTGCAG
TTGCCGCCGC GCGCCGCCAG CATCGGCCGC GTCGATGTGC GCGACACCGC TCAGCGCGCC
GCCGCCGAGG CCGAGGGCAC CTGGCTGCGC CCGGCCTACC TGGCCGCCTG CGTGTACGTG
GGCGCGGCGA CGCTGCTGTC GAGCCTGGTG CGGCCGGTGT TCGATCTCGC CAACATCGTC
ATGCTGTTCC TGGCGGCCGT GGTGGCCGTG GCGATGCGGC ACGGGCGCGG GCCGGCGGCG
CTGGCGTCGG TGCTGTCGGT GGCGCTGTTC GATTTCTTCT TCGTGCCGCC GCGCTACTCG
TTCGCCGTCA GCGATGTGCA ATACCTGCTG ACCTTCGCGG TGATGCTGGC GGTCGGCCTG
CTGGTCGGCC AGCTGACTGC GGGCCTGCGC GAACAGGCCG AGGCGGCCGT GCAGCGCGAA
GCCGCCGCGC GCGCGCTGTA CGAGGCGGCC CGCGAACTGT CGGCGGCGCT GACGCTGGAC
CAGATCGTCA GCATCGGCGG GCGCTTCGTC AACGCGACCT TCGGCGGGCG GTGCGCCTTT
TTCTTCGTCG GGCCCGACGG CCGCCTGGGC GCCGCGCAGG TGGCCAGGCC CGAGGGCACG
CCCGATGCGC CGTCCGGCAT GCCCAACCTC GACCGCGTGC TGGCCGACTG GACCTGCCAG
CACGGCCAGC CGGCCGGCAC CGGCACGCAT ACGCTGCCCT CGGGCTCGGT GCTCTACTTG
CCGCTGAAGG CGCCGATGGC CATCCGCGGC GTGCTGGCGG TCGAGCCCGA GACCTTCCAG
GTGCTGGCCC AGCCCGACAA CCGCCGCCAG ATCGACGCCT GCGCCACGCT GATCGCCATC
GCCATCGAGC GCGTGCACTA CGTGGAGATC GCCCAGGACG CCCTGTTGCG CATCGAATCG
GAGCGGCTGC GCAATTCGCT GCTGGCGGCG GTGTCGCATG ATCTGCGCAC GCCGCTGACC
GGGCTGGCGG GCATGGCCGA GACCCTGTTG CGCACGCAGC CGCCCCTGTC GCCGCTGCAG
GCCGAGGCCG CCGAGGCCAT CGGCGAACAG GCGCAGCGCA TGCGCGCGAT GGTCACCAAC
CTGCTCGACA TGGCCAGGCT GCAGAACCAC GACGTCAAGC TGCGGCTGGA GTGGCAGTCG
ATCGAGGAAC TGGTGGGGGC GGCGCTCAAG GGGACGCCGC TGCCCACGCA CGCCGTGGTG
GTGGATGACC TGGCCGACCT GCCGTTGCTG CGCTGCGATG GCCCGCTGAT GGAGCGCGTG
TTGTCCAACC TGCTGGAGAA CGCCGGCAAG TTCGCGCCGG CCGGGACCGA GGTGCGCATC
TCCGCCGGCG TGGTGCACGA CGCCGCGCAC GGCGACGAGA TGTGCGTGCG CGTGCGTGAC
CACGGGCCCG GCGTGCCGGC CGGGGCGGAG CGCGTCATCT TCGAGAAGTT CACGCGCGGC
GACAAGGAGT CCGCCACGGG TGGCGTCGGG CTGGGCCTGG CGGTGTGCGA GGCGATCGTC
AGCGCACACG GCGGGCGGAT CTGGGTCGAG ACGCCGGCCG ACGGCGGCGC CTGCTTCGTG
GTCGCGCTGC CGGCCAGCGA TCAGCCCGCC ATGGAGGACG ACATCCCCGC TTGA
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| Protein sequence | MDETRPNPDT LLAELQSGEE KAARGKLRIY FGASAGVGKT YAMLSAAKVA RAEGIDVVVG
LVETHGRAET AALVEGLEHL PPRQVEYRGR TLPEFDLDAA LARKPALILV DELAHSNVAG
SRHPKRWQDI EDLLAAGIDV WTTVNVQHLD SLNEAVGSIT GIRVWETVPD AVFDSAAEVI
LVDLPADELL RRLAEGKVYL PEQARHAARN FFRKGNLIAL RELALRRTAD RVDDDVQAYR
RARRIENVWR TRETIVACLD PQGDGEQVIR SAARLAAQLE CDWHAVAVVM PHLRAADARA
ERLHALLKMA EDAGARIETL AGTNAVEAIT GYVRRHNITK VVVGRPPARR WRSARAIVVA
LRLAIGLERR LPSGDFAEAL ARQCPEVDVI RAAADPARVQ LPPRAASIGR VDVRDTAQRA
AAEAEGTWLR PAYLAACVYV GAATLLSSLV RPVFDLANIV MLFLAAVVAV AMRHGRGPAA
LASVLSVALF DFFFVPPRYS FAVSDVQYLL TFAVMLAVGL LVGQLTAGLR EQAEAAVQRE
AAARALYEAA RELSAALTLD QIVSIGGRFV NATFGGRCAF FFVGPDGRLG AAQVARPEGT
PDAPSGMPNL DRVLADWTCQ HGQPAGTGTH TLPSGSVLYL PLKAPMAIRG VLAVEPETFQ
VLAQPDNRRQ IDACATLIAI AIERVHYVEI AQDALLRIES ERLRNSLLAA VSHDLRTPLT
GLAGMAETLL RTQPPLSPLQ AEAAEAIGEQ AQRMRAMVTN LLDMARLQNH DVKLRLEWQS
IEELVGAALK GTPLPTHAVV VDDLADLPLL RCDGPLMERV LSNLLENAGK FAPAGTEVRI
SAGVVHDAAH GDEMCVRVRD HGPGVPAGAE RVIFEKFTRG DKESATGGVG LGLAVCEAIV
SAHGGRIWVE TPADGGACFV VALPASDQPA MEDDIPA
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