Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3354 |
Symbol | |
ID | 1222218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3614923 |
End bp | 3615399 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239771 |
Product | transcription regulator protein |
Protein accession | NP_521473 |
Protein GI | 17548071 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCTC TCGATCCCTT TGATCTGGCC CTGCTTGCCG CCCTTCAGCG CGACGGCCGT GCGACCCACC AGCAGCTCTC GGAGCAGGTC CACCTGTCGG CCAGCCAGGT CGGGCGCCGG CTCGCGCGGC TGGAGGCGGA ACGGATCATC GAGGGCTACC GCGTGATCCT GTCACCGACG GGGCTGGGCC TGGGCGTGAC CGTTTTCGCC AGCGTCAAGC TCGCCCATCA CGGCGATGCC ATCGTCGAGC GGTTCCGCGA AGAGATCCTG CTGCTCGATG CCGTCCAGGA GTGCTATTCG GTGGCCGGCG ATGCTGACTA CATGCTGCGC GTGGTCGTGC CGGATCTGCC GGCGCTGTCG GAATTCGTGA TGCGCAAGCT GATGCGGGTG CCGGGCGTGG ACAATGTCCG CTCCAATATC GTGCTGACGG CACTCAAGCG CGACGGCGCT CTGCCGTTGG CTCACCTGGG CGGGTAG
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Protein sequence | MISLDPFDLA LLAALQRDGR ATHQQLSEQV HLSASQVGRR LARLEAERII EGYRVILSPT GLGLGVTVFA SVKLAHHGDA IVERFREEIL LLDAVQECYS VAGDADYMLR VVVPDLPALS EFVMRKLMRV PGVDNVRSNI VLTALKRDGA LPLAHLGG
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