Gene RSc3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3350 
SymbolompW 
ID1222214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3611240 
End bp3611965 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID637239767 
Productputative outer membrane W signal peptide protein 
Protein accessionNP_521469 
Protein GI17548067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.539621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTATA AAAAAGCACT GGCGGCCGCC GCCGGGATGA TCCTTGCCAC TGCCGCCCAC 
GCCCAAAGCG CGGGGAGCAA CATCGTCAGC CTCGGCTGGT TCCGCGTCAT GCCGAACAGC
TCGAGCGACC CGCTGCAGAT CGACAGCGTG GGTGGTGTGC CGCTCAACCG GTCGGTACCG
AACACGGGCG CCAAGATCAA GGACGCCGAT ACGCTCGGCC TCGCCTTCAC GCACTTCTTC
ACCGACAACC TGGCGGTCGA ACTGGTCGGC GGCATCCCGC CGCGCCACAA GATCGAGGGC
ACCGATTCCT TCGCGCGCTA CGGCCAGATC GGCTCGGCCA AGCAATGGAG CCCGACCGTG
CTGGCCAAGT GGTACTTCGG CGGCGCGGAC AGCAAGTTCC GCCCCTATGT CGGCGCAGGC
CTGAACTACA CCTGGTTCAC CGACGAGAAG ATCACCAACA GCGCGTTCCA GACCCAGGTG
CTGGGCAACG GCTTCCCGAG CACGAGCACC GTGTCGACCG ACAGCTCGCT CAACCCGGTG
GTGAGCGCGG GCGCCACGTA CGCCATCACC AAGGACTGGT TCCTTGGCCT GTCGGTGTCG
TACCTGCCGC TGAAGACCAC GGCCAAGATC GATACCACGC TGGCCAACGG CCAGCATGCC
GTGACCGAAG CGAAGATCAA GATCAACCCG ATCGTGACCT TCCTGTCGGT CGGCTACCGT
TTCTGA
 
Protein sequence
MAYKKALAAA AGMILATAAH AQSAGSNIVS LGWFRVMPNS SSDPLQIDSV GGVPLNRSVP 
NTGAKIKDAD TLGLAFTHFF TDNLAVELVG GIPPRHKIEG TDSFARYGQI GSAKQWSPTV
LAKWYFGGAD SKFRPYVGAG LNYTWFTDEK ITNSAFQTQV LGNGFPSTST VSTDSSLNPV
VSAGATYAIT KDWFLGLSVS YLPLKTTAKI DTTLANGQHA VTEAKIKINP IVTFLSVGYR
F