| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3346 |
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| Symbol | |
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| ID | 1222210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3607186 |
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| End bp | 3608046 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637239763 |
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| Product | putative lysophospholipase protein |
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| Protein accession | NP_521465 |
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| Protein GI | 17548063 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.413653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAG CCCCCGCCAC GGTCGATGCG CTGGAGACGC GCCAGCGGAT GAAGGATGGC
ACCGAGCTGT TCGTGCGGAC CTGGCTGCCG GCGCCCGAGG CGGGTGAGCC CCGCGGCACC
GTCATCCTCG TGCATGGCAT GGCCGAGCAC AGCGGCCGGT ATCCGCATGT GGCGCAGGTG
CTGTGCGAGC TCGGCCTGCG CGTGCGCGCC TTCGATCTGC GCGGCCACGG CAGGAGCGGC
GGCCCGCGCA TGGCGCTCGA CGCGCCCGAC AACTACCTCA CCGATCTCGC GGAAATTCTC
GATGCCGTCG TCGCCGAGTG GAACGAGATG CCGTTCGTGC TCGGCCACAG CATGGGCGGG
CTGATCGTCG CGCGCTTCGC CACCGCGCGC GTGCGGCCGG TGCGCGGCGT GCTGCTGTCG
TCGCCGGCGC TGCGGCTCAA GCTGCCGCCC GGCGCCAATG CCGTGCTCGG GCTGCTCAGC
GCGCTGGCGC CGAAGCTGCC GGTGCCCAAT CCCGTCGATC CTGCCAGGCT GTCGCATGAT
CCGTCGGTGG GCGCCGCGTA TCGGGCGGAT CCGCAGGTGC AGAAGACCAT CAGTGCGTCG
GTGCTGGCGT TCATGCTCAA CGCCATCACC CAGGCGCAGC AGGACGCGCC CCGGCTGGAG
GCGCCCATGT TGCTGCTGGC GGGCGGGGCG GACACCATCG TCGATCCTTC GGGCAGCCGG
GATTTCTGCG CCGGCGCGCC GGAGGACCTG CGCACGCTGG CCTGGTTCGA GACCGCGTAT
CACGAGCTGT TCAACGAGGC CGAGCCGATG CGCGGTGAAG CGTTCGGGAC GATGCGGGCG
TGGCTGGCCG GGCGGATCTG A
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| Protein sequence | MTQAPATVDA LETRQRMKDG TELFVRTWLP APEAGEPRGT VILVHGMAEH SGRYPHVAQV
LCELGLRVRA FDLRGHGRSG GPRMALDAPD NYLTDLAEIL DAVVAEWNEM PFVLGHSMGG
LIVARFATAR VRPVRGVLLS SPALRLKLPP GANAVLGLLS ALAPKLPVPN PVDPARLSHD
PSVGAAYRAD PQVQKTISAS VLAFMLNAIT QAQQDAPRLE APMLLLAGGA DTIVDPSGSR
DFCAGAPEDL RTLAWFETAY HELFNEAEPM RGEAFGTMRA WLAGRI
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