| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3316 |
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| Symbol | atpC |
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| ID | 1222180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3579462 |
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| End bp | 3579875 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239733 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | NP_521435 |
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| Protein GI | 17548033 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0532539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0655418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACCA TTCATGTAGA CGTCGTCAGC GCCGAGCAGG AGATCTTCTC CGGCGACGCC
AAGTTCGTGG CACTGCCGGG CGAAGCGGGC GAACTGGGCA TCCTGCCCGG CCACACGCCG
CTGATCACGC GCATCAAGCC GGGCGCCGTG CGCATCGAGA CCGAAGCTGG CGAAGAGTTC
GTCTTTGTCG CCGGTGGCAT TCTCGAAGTG CAGCCCAAGC ACGTCACCGT GCTGGCTGAC
ACCGCGATCC GTGGCCACGA CCTGGACGAA GCCAAGGCGA ACGAAGCCAA GCGTGCGGCC
GAAGAGGCGC TGCAGAACCA GAGCAGCGAC CTGGATCTGG CCCGTGCGCA AGGTGAGCTG
GCCGTGGCGA CTGCGCAGCT GGCAGCGATC GCGCGCCTGC GCCGCAAGCG CTGA
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| Protein sequence | MATIHVDVVS AEQEIFSGDA KFVALPGEAG ELGILPGHTP LITRIKPGAV RIETEAGEEF
VFVAGGILEV QPKHVTVLAD TAIRGHDLDE AKANEAKRAA EEALQNQSSD LDLARAQGEL
AVATAQLAAI ARLRRKR
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