| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3303 |
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| Symbol | hemE |
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| ID | 1222167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3565798 |
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| End bp | 3566892 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239720 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | NP_521422 |
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| Protein GI | 17548020 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0163615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC CGCTCGCCAA CGACACCTTC CTGCGTGCCC TGCGCCGCCA GCCCACCGAA
TACACGCCGC TGTGGCTGAT GCGCCAGGCG GGCCGCTACC TGCCCGAGTA CAACGCCACG
CGCGCGCGCG CCGGCAGCTT CCTGGGCCTG GCCAAGTCGC CGGCCTATGC CACCGAGGTG
ACGCTGCAGC CGCTGGACCG CTATCCGCTG GATGCCGCCA TCCTGTTCTC CGACATCCTG
ACCGTGCCCG ATGCGATGGG CCTGGGGCTG TCGTTCGAGC AGGGCGAAGG TCCGCGCTTC
GCGCGACCGG TGCGCTCCGA GGCGGACGTG GCCGCGCTGT CGGTGCCCGA CATGGCCTCG
TTGCAATACG TCTTCGATGC GGTGTCGGAA ATCCGCCGCG CGCTGGTGCA GGACGGCCGC
CAGCGCGTGC CGCTGATCGG CTTCTCGGGC AGCCCGTGGA CGCTGGCCTG CTACATGGTC
GAAGGCGGCG GCTCGGACGA CTTCCGCACC GTCAAGTCGA TGCTCTACGC GCGCCCGGAC
CTGATGCACC GCATCCTGGA AATCAACGCG GCCGCCGTGA TCGACTACCT GAACGCGCAG
ATCGACGCTG GCGCCCAGGC CGTGATGGTG TTCGACACCT GGGGCGGCGC GCTGGCCGAC
GGCATCTACC AGACGTTTTC GCTGGCCTAT ATGGCGCGCG TGGTGGAAGG CCTGCGCGCC
GGCGCGGACG GCCAGCGTGT GCCGGTGATC CTGTTCACCA AGGGCGGCGG GCTGTGGCTC
GAATCGATGG CCCAGACCGG CGCCGATGCG CTGGGCGTGG ACTGGACGGT CAACCTGCAG
CTGGCGCGCG TGCGCACCGG CGGCCGGGTG GCGCTGCAGG GCAACCTCGA CCCGACCGTG
CTGTTCGCCG AGCCGGATGC CATCCGCGCG CAGGTGCGCC GGGTGCTGGA GGACTATGCC
GCCGGCGGCG ACAGCGATGG CCATGTGTTC AACCTCGGTC ACGGCATCTC GCAGTTCACG
CCGCCGGAGT CGGTGGCGGT GCTGGTGGAC GAAGTGCACA CCTTCAGTCG CGCGCTGCGG
ACCCGCTTGC CGTAG
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| Protein sequence | MSAPLANDTF LRALRRQPTE YTPLWLMRQA GRYLPEYNAT RARAGSFLGL AKSPAYATEV
TLQPLDRYPL DAAILFSDIL TVPDAMGLGL SFEQGEGPRF ARPVRSEADV AALSVPDMAS
LQYVFDAVSE IRRALVQDGR QRVPLIGFSG SPWTLACYMV EGGGSDDFRT VKSMLYARPD
LMHRILEINA AAVIDYLNAQ IDAGAQAVMV FDTWGGALAD GIYQTFSLAY MARVVEGLRA
GADGQRVPVI LFTKGGGLWL ESMAQTGADA LGVDWTVNLQ LARVRTGGRV ALQGNLDPTV
LFAEPDAIRA QVRRVLEDYA AGGDSDGHVF NLGHGISQFT PPESVAVLVD EVHTFSRALR
TRLP
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