| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3277 |
|---|
| Symbol | |
|---|
| ID | 1222141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 3528311 |
|---|
| End bp | 3528898 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637239694 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_521396 |
|---|
| Protein GI | 17547994 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1739] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.78794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGACCT ACACCTTGCG CGCGCCGGTC AGGGCCGAGC TGGAGATCCG GAAAAGCCGC
TTCATCGGGC TGGCCGTGCC GGTCGAGGAC CGCGCCGCCG CCATGGACGT GATCGCCCGG
CTGCGCGCCG AGCACCCCGC CGCCACGCAC GTCTGCTGGG CCCTGCTGGC CGGCGGGCAA
TCCGGCATGT CGGACGACGG CGAGCCCTCC GGCACCGCCG GCCGGCCCAT CCTCGAAGTG
CTGCGCCATC ACGATCTGGA CGGCACGCTG GGCGCGGTGG TGCGCTACTT CGGCGGGGTC
AAGCTGGGCG CCGGCGGACT GGTGCGCGCC TACACCGATG CCATCGCCAC CGCGCTGATG
GGGGCGGAGC GCGTCGAGCG CATCGCCCGC ACCACGCTCA CGCTCGTCAC CGACTACGCC
GACGAGGCGC GCATCCGCCG CTGGATCGAC GATGCCGGCT ATGCGCTGGT CGATGCCGCC
TACGATGCGG GCGTCACGCT GGCGGTGCGC CTGCCCGTGA CGGACGAGGC CGCCGCGCGC
ACGACGCTGC GGGACCTGAC GCAGGGGCGC GTGGTCATCC CGGACTGA
|
|---|
| Protein sequence | MPTYTLRAPV RAELEIRKSR FIGLAVPVED RAAAMDVIAR LRAEHPAATH VCWALLAGGQ
SGMSDDGEPS GTAGRPILEV LRHHDLDGTL GAVVRYFGGV KLGAGGLVRA YTDAIATALM
GAERVERIAR TTLTLVTDYA DEARIRRWID DAGYALVDAA YDAGVTLAVR LPVTDEAAAR
TTLRDLTQGR VVIPD
|
|---|
| |