Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3264 |
Symbol | |
ID | 1222128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3516874 |
End bp | 3517689 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637239681 |
Product | putative signal peptide protein |
Protein accession | NP_521383 |
Protein GI | 17547981 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCC CGTTGCCCAC GTCTGCCCGT CTCAAGCGCA CCGTCGTGCT GGCCGCCCTG GCCGGCATCA CCGCCACGCA GCTGACGGCG TGCTTCCCGC TGTTTGCCGG TGCCGTGGCC GGCGGTGTGG CGCTGGCCAC CGACCGCCGC CCGACCGCCA CGCAGACCAT CGACCGCGGC CTGCAGATGG AGGCCGAGAA CTCCCTGATC GCGCGCTACA GCGGCCTGGC GCACGTGAAC GTGACGGTCT ACAACCGCAA GGTGCTGCTG ACCGGCGAGG CCCGCGACGA GCAGGTCAAG CAGCAGATCA GCCAGTACGC GCAGAAACTG GAGAACGCCC GCGAGGTGGT CAACGAGATG ACCATCGGCG AGTTCAGTTC GTTCGGCGCG CGCACCAACG ACACCTACCT GACCACCAAG GTGAAGGCCG CGCTGGCCGG CACCGAGGGG CTGCCCTGGA ACTCGATCAA GGTGACCACG GAGGCGCAGG CCGTCTACCT GATGGGCGTG GTGACCGAAT CCGAGGGCGA GCACGCCACC GAGGTCGCGC GCACGGTAGG CGGCGTGGGC AAGGTGGTCA AGGTGTTCGA CTATGTCAGC GAAGACGAGC GCAAGCGCCT GGACGCGAAC GCCTCGTCGA CCAACCCGTC GACCCCATCC GGTGCATCGC AAACCACGCA GGCGCCGCAG GGCACCTCGA CCGCCACGCA GGCGCCGGCA CCGGTGACCT CTTCTTCGCC CGGCCAGCCC GGCGCGGGCG CGACCGTGTC GCCGACCACG CTGCCGGCGT TGCCGCCGGG CCGGCAGTTG CCGTAA
|
Protein sequence | MKLPLPTSAR LKRTVVLAAL AGITATQLTA CFPLFAGAVA GGVALATDRR PTATQTIDRG LQMEAENSLI ARYSGLAHVN VTVYNRKVLL TGEARDEQVK QQISQYAQKL ENAREVVNEM TIGEFSSFGA RTNDTYLTTK VKAALAGTEG LPWNSIKVTT EAQAVYLMGV VTESEGEHAT EVARTVGGVG KVVKVFDYVS EDERKRLDAN ASSTNPSTPS GASQTTQAPQ GTSTATQAPA PVTSSSPGQP GAGATVSPTT LPALPPGRQL P
|
| |