| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3221 |
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| Symbol | tISRso1 |
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| ID | 1222084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3483333 |
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| End bp | 3484175 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637239639 |
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| Product | transposase |
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| Protein accession | NP_521342 |
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| Protein GI | 17547940 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3293] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000851994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTGGTGTA AAGGCGGGAT CTGGAAAAAA GAACATCGAG AACGCGAGGC GAAGCTGGGT
CGCAAGACCA AGCGGTACCC AAGCGACCTG ACGGATATCG AATGGGTCGC TGTGCAGCCG
TTGCTGCCCG GCGCCGCCGT GCGAGGTCGG CGCCGGGAGT GCGACTTGAG GGAGGTGGTC
AACGCGCTGC GGTACCTGGT GCGGGCGGGC TGCGGCTGGC GCATGCTGCC CCATGACTTC
CCGCCGTGGC AGACCGTGTA TTGGTGGTTT CGGCGGCTCA TGCGCCGCTT GCTGTTCCGC
ACGCTGCACG ACGTGGTGCT GATGCTAGAC CGGGAGTTGG CTGGGCGGCA GCCGTGCCCG
AGTGCGGGCG TCATCGACAG CCAGACAGTC AAAGCGCCCT CGGCCGACAA GCGTGGCTAC
GACGCGGCCA AGAAAATCGT CGGGCGCAAG CGGCATATCG CGGTGGACAC GGATGGACGG
CTGCTGATGG TGAACCTGAC GTCGGCGGAT ATTGCCGACA GCACGGGGGC ACTGGCGGTG
CTGGAAGCGG TGAAGAAGCG CTGGCCGGGT GTGAAACACC TGTTCGCAGA CGGCGCCTAC
GACCGCACGG CGCTGATGGA CAGGGCCGCG ACCCTCGACT TCGTGGTTGA GGTGGTGCGC
CGGCACGAGC AGCAAACGGG CTTTGCCGTT CTGCCGCGCC GCTGGGTGGT CGAGCGCACC
TTTGGGTGGA TGGTTCGCTG GCGCCGACTC GTACGCGACT ACGAGCAGCG CGCGGACGTC
TCGGAAGCCA TGATTCATAT CGCGATGAGC GGCTTGCTAC TGCGCAGAAT CGCTCATCGT
TGA
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| Protein sequence | MWCKGGIWKK EHREREAKLG RKTKRYPSDL TDIEWVAVQP LLPGAAVRGR RRECDLREVV
NALRYLVRAG CGWRMLPHDF PPWQTVYWWF RRLMRRLLFR TLHDVVLMLD RELAGRQPCP
SAGVIDSQTV KAPSADKRGY DAAKKIVGRK RHIAVDTDGR LLMVNLTSAD IADSTGALAV
LEAVKKRWPG VKHLFADGAY DRTALMDRAA TLDFVVEVVR RHEQQTGFAV LPRRWVVERT
FGWMVRWRRL VRDYEQRADV SEAMIHIAMS GLLLRRIAHR
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