| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3209 |
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| Symbol | |
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| ID | 1222072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3471334 |
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| End bp | 3472140 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637239627 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_521330 |
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| Protein GI | 17547928 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.821388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.102605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACT CCAAAGTTGT CCTCATTACC GGTGTGTCTT CGGGCATCGG CCGTGCCACC
GCAGCGAAGT TTGCGTTGCG GGGCTGCCGG GTATTCGGCA CCGTGCGCAA CCTCGCAAAA
GCTCAGCCGA TACCGGGCGT TGAACTGGTC GAGATGGATA TCCGCGATCA AGCGTCGGTT
CAGCAGGGAA TCCAGACCCT CATCGCACAG GCCAAGCGCA TCGATGTGCT GGTCAATAGT
GCCGGCGTGA CGCTGCTCGG CGCGACCGAA GAAACGTCGA TCGCCGAAGC GCAGGCGCTG
TTCGACACCA ACGTGTTTGG CATCTTGCGC ACCACACAAG CCGCATTGCC GCACATGCGC
GCGCAACGTT CGGGAAGAAT CATCAACATC AGCTCGGTGC TCGGCTTTCT GCCGGCGCCG
TACATGGGCC TCTATTCGGC GTCCAAACAC GCCGTGGAGG GGATGTCCGA GACGCTGGAC
CACGAGGTGC GCAAGTTCGG CATCCGTGTC GTGCTTGTCG AACCCTCATT TACCAAGACC
AGCCTGGATA TCAATGCCCC CCATGCGGTT TCCAAGGTAT CTGCCTACGA CGACGAGCGC
AGCGTCGTTT CGCAGGCGAT TCAAAAAAGT GTCCAAAAAG CACCGGAACC CGATGGTGTC
GCGAGCACGG TCGTCGATGC CGCCCTAGGT GCGTGGAAGA TGCGCCGTAC ACCCAAAGGC
GAGGCATCCC TTCTGGGCAA GCTGCGCCGT TTCATGCCGG CAGGCCCGGT CGATGCAAGT
CTGCGGAAGA CGTTCGGGCT CTCCTGA
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| Protein sequence | MSNSKVVLIT GVSSGIGRAT AAKFALRGCR VFGTVRNLAK AQPIPGVELV EMDIRDQASV
QQGIQTLIAQ AKRIDVLVNS AGVTLLGATE ETSIAEAQAL FDTNVFGILR TTQAALPHMR
AQRSGRIINI SSVLGFLPAP YMGLYSASKH AVEGMSETLD HEVRKFGIRV VLVEPSFTKT
SLDINAPHAV SKVSAYDDER SVVSQAIQKS VQKAPEPDGV ASTVVDAALG AWKMRRTPKG
EASLLGKLRR FMPAGPVDAS LRKTFGLS
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