Gene RSc3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3156 
SymbolcspC 
ID1222019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3410931 
End bp3411134 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content56% 
IMG OID637239574 
Productcold shock-like transcription regulator protein 
Protein accessionNP_521277 
Protein GI17547875 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.82157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG GTACCGTAAA GTGGTTCAAC GAATCGAAGG GTTTTGGCTT CATCACGCCT 
GACGCGGGTG GAAACGATCT CTTCGCGCAT TTCTCCGAAA TTCAGGGCAG CGGCTTCAAA
ACGCTGCAAG AGGGCGAGAA GGTGCGTTAC GTTGCTGGCG TCGGCCAAAA GGGCCCCGCA
GCCACCAAGA TCGAACGGAT CTGA
 
Protein sequence
METGTVKWFN ESKGFGFITP DAGGNDLFAH FSEIQGSGFK TLQEGEKVRY VAGVGQKGPA 
ATKIERI