| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3131 |
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| Symbol | ldhA |
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| ID | 1221995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3377711 |
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| End bp | 3378739 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637239549 |
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| Product | D-lactate dehydrogenase |
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| Protein accession | NP_521252 |
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| Protein GI | 17547850 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.382802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCATC ACCGGCTTCC CTCACCCACC GTCATGCGCA TCCTCTTCTT CAGCAGCCAC
CGTTACGACG AAGACGCCTT CCGCGCCGCG CAGGCGCGCG GCGGCCACGG CTTCGAGCTG
GTCTTCCAGC GCGCCCACCT GGACGTGCAC ACCGCACCGC TGGCCGCCGG CTTCGAGGTG
GTCTGCCCGT TCGTCAACGA CTGCCTGGAT GCCGGCGTGC TCGCCGTGCT GGCCGCGGGC
GGCGCCCGGC TGATCGCGCT GCGCTCGGCC GGCTTCAACC ATGTCGACCT GGCCGCGGCG
CAGCGGCTGG GGCTGACGGT GGTGCGGGTG CCGGCGTATT CGCCGCACGC GGTGGCCGAG
CACGCGGTCG GCATGATCCT CACGCTCAAC CGGCGCCTGC ACCGCGCCTG CAACCGCACC
CGCGAGGGCG ACTTCTCGCT CGACGGGCTG CTCGGCTTCG ACCTGGCCGG CAAGACCGTC
GGCGTGGTCG GCACCGGGCA GATCGGGCAG GTGTTCGCGC GCATCATGGC CGGCTTCGGC
TGCCGGCTGC TGGCGTTCGA TCCGTTCCCG CAGCCGGCGC TGGCGGCGCT CGGCGTGACC
TACGTGCCGC TGCCGGCTCT GCTGGCGCAG TCCGACATCG TCAGCCTGCA CTGCCCGCTC
AACGCCGACA CGCACCACCT GATCGACGCC GGCGCACTCG CCAGCATGAA GACGGGCGCC
ATGCTGATCA ACACCAGCCG CGGCGGGCTG GTCGACAGCC CCGCACTGAT CGACGCCCTC
AAATCCGGCC AGCTCGGCCA CCTCGGACTG GATGTTTATG AGGAAGAGGC CGACCTGTTC
TTCGAGGACC GCTCCGCCGA TGTGCTGCAG GACGACGTGC TGGCGCGCCT GCTGACCTTC
CCCAATGTCA TCGTGACCGC GCACCAGGCC TTCTTCACGC GCGAGGCGCT GGCGGGCATT
GCCGACACCA CGCTCGCCAA CGTGGCGGCA TGGGCAGCCG GCGCGCCCGC GAATGTGGTG
AAGGCTTAG
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| Protein sequence | MPHHRLPSPT VMRILFFSSH RYDEDAFRAA QARGGHGFEL VFQRAHLDVH TAPLAAGFEV
VCPFVNDCLD AGVLAVLAAG GARLIALRSA GFNHVDLAAA QRLGLTVVRV PAYSPHAVAE
HAVGMILTLN RRLHRACNRT REGDFSLDGL LGFDLAGKTV GVVGTGQIGQ VFARIMAGFG
CRLLAFDPFP QPALAALGVT YVPLPALLAQ SDIVSLHCPL NADTHHLIDA GALASMKTGA
MLINTSRGGL VDSPALIDAL KSGQLGHLGL DVYEEEADLF FEDRSADVLQ DDVLARLLTF
PNVIVTAHQA FFTREALAGI ADTTLANVAA WAAGAPANVV KA
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