| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3129 |
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| Symbol | |
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| ID | 1221993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3374673 |
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| End bp | 3376586 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637239547 |
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| Product | transcription regulator protein |
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| Protein accession | NP_521250 |
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| Protein GI | 17547848 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.869922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGATC ACCGCATGTC GCATCACACC GGCCAGGTGC TGACCCTCGC GCAGCACGAC
GCGCCCATCT CGGGTTCGCT GTCCGGGCCG GCCGCCGATC CGTCCATCGC TCGCTCCTGG
CTGCGCTGCC TGCACCAGCA CGGCCTCGAC CCCGCAAACG CCAGCGCCCC CGCCGTGCTC
GAAGCCGCCC GCATCCGCGA GCGCCGCGAG CAGCTGCAGC CGATGCTGCG CATCGCCGAC
GGCGAAATGC ACAGCCTGCA TCGGCAGCTG GCCGGCAACG GCCACGTGGT GGTGCTGACC
GATGCCGACG GCGTGATCCT CGACTGCATC GCCGACCACG CGGAGCGCGC CCTGTTCCGG
CAGGCCGGCC TGTGGTCCGG CGCCGACTGG AGCGAAGCCC GCGAAGGCAC CAACGGCATC
GGCACCTGCG CGGTCGAGCG GCAGGCGCTG ACGATCTACC AGGACGAACA CTTCCGCAGC
CGCCACATCC GGCTGTCGTG CTCGGCCAGC CCCGTGTTCG ATCCGCAGGG CAACCTGCTG
GCGGTGCTGG ATGTGTCGTC CATCCCGCGC GAGCTGTCGC GGCAGGGGCA GTTCCATACC
ACCGCGCTGG TCAACCTCTC GGCCAAGGTG ATCGAGGGCG GGTATTTTCT GCAGCATTTC
GAGCGCGACT GGCTGCTGCG CTTCCATGCC CAGCCCGAAT ACGTCGGGCT GTTCAGCGAG
GGCCTGCTGG CGGTGGGCGG CGACGGACGC ATCCGCGCGG CCAACCAGAG CGCGCTGAAC
CTGCTGGGCC GCACGCGCCA ATCGCTGCTC GGGCAGCCGG TCGAGACCGT GTTCGACCTG
ACGGCCGACG CCCTGCTCGC GCGCGCCACC GACAGCGGCG GCGTGGCCTG GCCGCTGCAC
ACGCATCAGG GTCGCCTGCT GTTCGGCCTG CTGCGCGCGC CCCGCCCGCG CCCGACCGCC
GACGCGGCCC CGGCCTCACC GCCCATGCCG GCCACGCCCG GCCTGTGCCT GCAGGCCGAC
GGCCTGCGCA CCGGCTTCCA CCGCGCCCTG CGCGTGTTCG AGCACGACGT GCCGCTGCTG
CTGCACGGCG AGACCGGCAC CGGCAAGGAA GCCTTCGCCC GCGCCGTGCA CCAGGCCAGC
AGCCGCGCGG CGCAGCCCTT CGTCGCCGTC AATTGCGCGG CGATTCCCGA GACGCTGATC
GAGAGCGAGC TGTTCGGCTA CCGCGGCGGC AGCTTCACCG GCGCGCGCCG GGAAGGCATG
CGCGGCAAGC TGCAGCAGGC CGACGGCGGC ACGCTGTTCC TCGACGAGAT CGGCGACATG
CCGCTGGCGC TGCAGAGCCG GCTGCTGCGC GTGCTGGAGG AGCGCGCCGT GGTGCCCATC
GGTGGCGAGG CGCAGACGGT GGACGTGCGC ATCGTCAGCG CCAGCCATCG CGACATGGAA
GCGCGCGTGC GCGACGGCCG CTTCCGCGAA GACCTGTACT ACCGCCTCAA CGGCCTGCGG
ATCACGCTGC CGCCGCTGCG CGAGCGTGCC GACAAGGCCG CGCTGCTGGC GCACGTGCTG
GCCGAGGAAT CGCGCGGCCG GCCGGCGCGG CTCGACGACG ATGCGCGCGA CGCCCTGCTC
GCCCAGCCCT GGCCCGGCAA CGTGCGCCAG CTGCGCAATG TGCTGCGCAC GCTGGTGGCG
CTGTCCGACG ATGGGCGCAT CCGCCTGCGC GACCTGCCGC CCGAACTGCG CCCGCCGGCC
ATGGCATCCG CCGCCGCGCC CGCGCCGCTG GACAACGCCG AGAAGGCCGC GCTGCTCGCC
GCGCTGCAAG CGCAGCAGTG GCGCATGACC CACGCCGCCA AGGCGCTGGG CATCAGCCGC
AACACGCTGT ACCGCAAGCT GCGCAAGCAC GGCATCGCCC GCCCCGGCGG TTGA
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| Protein sequence | MQDHRMSHHT GQVLTLAQHD APISGSLSGP AADPSIARSW LRCLHQHGLD PANASAPAVL
EAARIRERRE QLQPMLRIAD GEMHSLHRQL AGNGHVVVLT DADGVILDCI ADHAERALFR
QAGLWSGADW SEAREGTNGI GTCAVERQAL TIYQDEHFRS RHIRLSCSAS PVFDPQGNLL
AVLDVSSIPR ELSRQGQFHT TALVNLSAKV IEGGYFLQHF ERDWLLRFHA QPEYVGLFSE
GLLAVGGDGR IRAANQSALN LLGRTRQSLL GQPVETVFDL TADALLARAT DSGGVAWPLH
THQGRLLFGL LRAPRPRPTA DAAPASPPMP ATPGLCLQAD GLRTGFHRAL RVFEHDVPLL
LHGETGTGKE AFARAVHQAS SRAAQPFVAV NCAAIPETLI ESELFGYRGG SFTGARREGM
RGKLQQADGG TLFLDEIGDM PLALQSRLLR VLEERAVVPI GGEAQTVDVR IVSASHRDME
ARVRDGRFRE DLYYRLNGLR ITLPPLRERA DKAALLAHVL AEESRGRPAR LDDDARDALL
AQPWPGNVRQ LRNVLRTLVA LSDDGRIRLR DLPPELRPPA MASAAAPAPL DNAEKAALLA
ALQAQQWRMT HAAKALGISR NTLYRKLRKH GIARPGG
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