Gene RSc3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3102 
Symbol 
ID1221966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3340544 
End bp3341032 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID637239520 
Producttranscription regulator protein 
Protein accessionNP_521223 
Protein GI17547821 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.327288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG TGGAACTGGA CAAGATCGAC CGCAAGATTC TGGAGGTCCT CCAGAGCAAT 
GGCCGTCTCA CCAACCTGGA GGTCGCCGAG CGGGTGAATC TGTCGCCCAG CCCCTGCCTG
CGCCGCATCC GCCGCCTGGA GGAAAGCGGC GTGATCCGCC AGTACGCTGC GCTGCTCGAC
CCGGGCAAGA TCGGCCTGGG CCTGTCGGCC TACATCAACG TGCGGCTGGA GAAGCAGGGC
GGCGCACCCA AGGGCAAGGC GCCCTCCGAC ATTTTCCGCG CCGCCGTCGC CACCTGGCCC
GAGGTCGTCA CCTGCTACGC CATGACCGGC GAGATGGACT ACCTGCTCAA GGTGTTCGTC
GAAGACATGG ATCACTTCGC CCGCTTCATC CGCGACCAGC TGCTGGCGCA TCCGGCGGTG
ATCGACGTCA AGAGCAGTTT CGCGCTGGAG CGGATCAAGG ATACGACCGC GTTGCCGGTC
GTGGTTTGA
 
Protein sequence
MSKVELDKID RKILEVLQSN GRLTNLEVAE RVNLSPSPCL RRIRRLEESG VIRQYAALLD 
PGKIGLGLSA YINVRLEKQG GAPKGKAPSD IFRAAVATWP EVVTCYAMTG EMDYLLKVFV
EDMDHFARFI RDQLLAHPAV IDVKSSFALE RIKDTTALPV VV