Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3102 |
Symbol | |
ID | 1221966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3340544 |
End bp | 3341032 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239520 |
Product | transcription regulator protein |
Protein accession | NP_521223 |
Protein GI | 17547821 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.327288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGG TGGAACTGGA CAAGATCGAC CGCAAGATTC TGGAGGTCCT CCAGAGCAAT GGCCGTCTCA CCAACCTGGA GGTCGCCGAG CGGGTGAATC TGTCGCCCAG CCCCTGCCTG CGCCGCATCC GCCGCCTGGA GGAAAGCGGC GTGATCCGCC AGTACGCTGC GCTGCTCGAC CCGGGCAAGA TCGGCCTGGG CCTGTCGGCC TACATCAACG TGCGGCTGGA GAAGCAGGGC GGCGCACCCA AGGGCAAGGC GCCCTCCGAC ATTTTCCGCG CCGCCGTCGC CACCTGGCCC GAGGTCGTCA CCTGCTACGC CATGACCGGC GAGATGGACT ACCTGCTCAA GGTGTTCGTC GAAGACATGG ATCACTTCGC CCGCTTCATC CGCGACCAGC TGCTGGCGCA TCCGGCGGTG ATCGACGTCA AGAGCAGTTT CGCGCTGGAG CGGATCAAGG ATACGACCGC GTTGCCGGTC GTGGTTTGA
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Protein sequence | MSKVELDKID RKILEVLQSN GRLTNLEVAE RVNLSPSPCL RRIRRLEESG VIRQYAALLD PGKIGLGLSA YINVRLEKQG GAPKGKAPSD IFRAAVATWP EVVTCYAMTG EMDYLLKVFV EDMDHFARFI RDQLLAHPAV IDVKSSFALE RIKDTTALPV VV
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